Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.65■□□□□ 0.9
Sh2d4aQ9D7V1 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.65■□□□□ 0.9
Sh2d4aQ9D7V1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sh2d4aQ9D7V1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sh2d4aQ9D7V1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sh2d4aQ9D7V1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sh2d4aQ9D7V1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Sh2d4aQ9D7V1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sh2d4aQ9D7V1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.64■□□□□ 0.89
Sh2d4aQ9D7V1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sh2d4aQ9D7V1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sh2d4aQ9D7V1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.64■□□□□ 0.89
Sh2d4aQ9D7V1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sh2d4aQ9D7V1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sh2d4aQ9D7V1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Sh2d4aQ9D7V1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sh2d4aQ9D7V1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh2d4aQ9D7V1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh2d4aQ9D7V1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.63■□□□□ 0.89
Sh2d4aQ9D7V1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sh2d4aQ9D7V1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sh2d4aQ9D7V1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Sh2d4aQ9D7V1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh2d4aQ9D7V1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh2d4aQ9D7V1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh2d4aQ9D7V1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Sh2d4aQ9D7V1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh2d4aQ9D7V1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
Sh2d4aQ9D7V1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh2d4aQ9D7V1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.62■□□□□ 0.89
Sh2d4aQ9D7V1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh2d4aQ9D7V1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh2d4aQ9D7V1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Sh2d4aQ9D7V1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Sh2d4aQ9D7V1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh2d4aQ9D7V1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sh2d4aQ9D7V1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh2d4aQ9D7V1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh2d4aQ9D7V1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh2d4aQ9D7V1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh2d4aQ9D7V1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Sh2d4aQ9D7V1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Sh2d4aQ9D7V1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh2d4aQ9D7V1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh2d4aQ9D7V1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh2d4aQ9D7V1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Sh2d4aQ9D7V1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh2d4aQ9D7V1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Sh2d4aQ9D7V1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh2d4aQ9D7V1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh2d4aQ9D7V1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Sh2d4aQ9D7V1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh2d4aQ9D7V1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.6■□□□□ 0.89
Sh2d4aQ9D7V1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Sh2d4aQ9D7V1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh2d4aQ9D7V1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sh2d4aQ9D7V1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh2d4aQ9D7V1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh2d4aQ9D7V1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sh2d4aQ9D7V1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sh2d4aQ9D7V1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Sh2d4aQ9D7V1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh2d4aQ9D7V1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.57■□□□□ 0.88
Sh2d4aQ9D7V1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sh2d4aQ9D7V1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh2d4aQ9D7V1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh2d4aQ9D7V1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh2d4aQ9D7V1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.56■□□□□ 0.88
Sh2d4aQ9D7V1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
Sh2d4aQ9D7V1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sh2d4aQ9D7V1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh2d4aQ9D7V1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh2d4aQ9D7V1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh2d4aQ9D7V1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh2d4aQ9D7V1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.55■□□□□ 0.88
Sh2d4aQ9D7V1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh2d4aQ9D7V1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Sh2d4aQ9D7V1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sh2d4aQ9D7V1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh2d4aQ9D7V1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sh2d4aQ9D7V1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh2d4aQ9D7V1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Sh2d4aQ9D7V1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh2d4aQ9D7V1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Sh2d4aQ9D7V1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Sh2d4aQ9D7V1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh2d4aQ9D7V1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.54■□□□□ 0.88
Sh2d4aQ9D7V1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Sh2d4aQ9D7V1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Sh2d4aQ9D7V1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh2d4aQ9D7V1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh2d4aQ9D7V1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh2d4aQ9D7V1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh2d4aQ9D7V1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh2d4aQ9D7V1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh2d4aQ9D7V1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh2d4aQ9D7V1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh2d4aQ9D7V1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh2d4aQ9D7V1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Sh2d4aQ9D7V1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms