Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Upk1aQ9D132 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Upk1aQ9D132 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Upk1aQ9D132 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.42■□□□□ 0.86
Upk1aQ9D132 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Upk1aQ9D132 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Upk1aQ9D132 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Upk1aQ9D132 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.42■□□□□ 0.86
Upk1aQ9D132 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Upk1aQ9D132 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Upk1aQ9D132 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Upk1aQ9D132 Gm11599-201ENSMUST00000118720 878 ntBASIC20.41■□□□□ 0.86
Upk1aQ9D132 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Upk1aQ9D132 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Upk1aQ9D132 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Upk1aQ9D132 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Upk1aQ9D132 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Upk1aQ9D132 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Upk1aQ9D132 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Upk1aQ9D132 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Upk1aQ9D132 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Upk1aQ9D132 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Upk1aQ9D132 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Upk1aQ9D132 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Upk1aQ9D132 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Upk1aQ9D132 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Upk1aQ9D132 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Upk1aQ9D132 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Upk1aQ9D132 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Upk1aQ9D132 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Upk1aQ9D132 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Upk1aQ9D132 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Upk1aQ9D132 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Upk1aQ9D132 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Upk1aQ9D132 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Upk1aQ9D132 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Upk1aQ9D132 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Upk1aQ9D132 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Upk1aQ9D132 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Upk1aQ9D132 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.36■□□□□ 0.85
Upk1aQ9D132 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.36■□□□□ 0.85
Upk1aQ9D132 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.36■□□□□ 0.85
Upk1aQ9D132 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Upk1aQ9D132 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Upk1aQ9D132 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Upk1aQ9D132 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Upk1aQ9D132 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Upk1aQ9D132 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Upk1aQ9D132 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Upk1aQ9D132 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Upk1aQ9D132 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Upk1aQ9D132 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.35■□□□□ 0.85
Upk1aQ9D132 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Upk1aQ9D132 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
Upk1aQ9D132 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Upk1aQ9D132 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Upk1aQ9D132 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Upk1aQ9D132 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Upk1aQ9D132 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Upk1aQ9D132 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Upk1aQ9D132 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Upk1aQ9D132 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Upk1aQ9D132 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Upk1aQ9D132 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.33■□□□□ 0.84
Upk1aQ9D132 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Upk1aQ9D132 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.32■□□□□ 0.84
Upk1aQ9D132 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Upk1aQ9D132 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Upk1aQ9D132 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Upk1aQ9D132 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Upk1aQ9D132 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Upk1aQ9D132 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Upk1aQ9D132 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Upk1aQ9D132 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Upk1aQ9D132 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Upk1aQ9D132 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Upk1aQ9D132 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Upk1aQ9D132 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Upk1aQ9D132 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Upk1aQ9D132 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Upk1aQ9D132 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Upk1aQ9D132 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Upk1aQ9D132 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Upk1aQ9D132 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Upk1aQ9D132 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Upk1aQ9D132 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.29■□□□□ 0.84
Upk1aQ9D132 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Upk1aQ9D132 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.29■□□□□ 0.84
Upk1aQ9D132 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.29■□□□□ 0.84
Upk1aQ9D132 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Upk1aQ9D132 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Upk1aQ9D132 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Upk1aQ9D132 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Upk1aQ9D132 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Upk1aQ9D132 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Upk1aQ9D132 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Upk1aQ9D132 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Upk1aQ9D132 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Upk1aQ9D132 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Upk1aQ9D132 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms