Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Raet1eQ9CZQ6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Raet1eQ9CZQ6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Raet1eQ9CZQ6 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Raet1eQ9CZQ6 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.85■□□□□ 0.61
Raet1eQ9CZQ6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Raet1eQ9CZQ6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.85■□□□□ 0.61
Raet1eQ9CZQ6 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.85■□□□□ 0.61
Raet1eQ9CZQ6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Raet1eQ9CZQ6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Raet1eQ9CZQ6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Raet1eQ9CZQ6 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Raet1eQ9CZQ6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Raet1eQ9CZQ6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Raet1eQ9CZQ6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.84■□□□□ 0.61
Raet1eQ9CZQ6 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Raet1eQ9CZQ6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Raet1eQ9CZQ6 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.84■□□□□ 0.61
Raet1eQ9CZQ6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Raet1eQ9CZQ6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Raet1eQ9CZQ6 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Raet1eQ9CZQ6 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.83■□□□□ 0.61
Raet1eQ9CZQ6 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Raet1eQ9CZQ6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Raet1eQ9CZQ6 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.83■□□□□ 0.6
Raet1eQ9CZQ6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Raet1eQ9CZQ6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Raet1eQ9CZQ6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Raet1eQ9CZQ6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Raet1eQ9CZQ6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Raet1eQ9CZQ6 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Raet1eQ9CZQ6 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Raet1eQ9CZQ6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Raet1eQ9CZQ6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.82■□□□□ 0.6
Raet1eQ9CZQ6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Raet1eQ9CZQ6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Raet1eQ9CZQ6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Raet1eQ9CZQ6 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Raet1eQ9CZQ6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.82■□□□□ 0.6
Raet1eQ9CZQ6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Raet1eQ9CZQ6 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Raet1eQ9CZQ6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Raet1eQ9CZQ6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Raet1eQ9CZQ6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Raet1eQ9CZQ6 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Raet1eQ9CZQ6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Raet1eQ9CZQ6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Raet1eQ9CZQ6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Raet1eQ9CZQ6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Raet1eQ9CZQ6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Raet1eQ9CZQ6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
Raet1eQ9CZQ6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Raet1eQ9CZQ6 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Raet1eQ9CZQ6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Raet1eQ9CZQ6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Raet1eQ9CZQ6 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Raet1eQ9CZQ6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Raet1eQ9CZQ6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Raet1eQ9CZQ6 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Raet1eQ9CZQ6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Raet1eQ9CZQ6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Raet1eQ9CZQ6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Raet1eQ9CZQ6 Gm9812-201ENSMUST00000061934 968 ntBASIC18.79■□□□□ 0.6
Raet1eQ9CZQ6 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Raet1eQ9CZQ6 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
Raet1eQ9CZQ6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Raet1eQ9CZQ6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.79■□□□□ 0.6
Raet1eQ9CZQ6 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Raet1eQ9CZQ6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Raet1eQ9CZQ6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Raet1eQ9CZQ6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Raet1eQ9CZQ6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Raet1eQ9CZQ6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Raet1eQ9CZQ6 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.78■□□□□ 0.6
Raet1eQ9CZQ6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Raet1eQ9CZQ6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.78■□□□□ 0.6
Raet1eQ9CZQ6 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.77■□□□□ 0.6
Raet1eQ9CZQ6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Raet1eQ9CZQ6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Raet1eQ9CZQ6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.77■□□□□ 0.6
Raet1eQ9CZQ6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Raet1eQ9CZQ6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Raet1eQ9CZQ6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Raet1eQ9CZQ6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
Raet1eQ9CZQ6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Raet1eQ9CZQ6 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Raet1eQ9CZQ6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Raet1eQ9CZQ6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Raet1eQ9CZQ6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Raet1eQ9CZQ6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Raet1eQ9CZQ6 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Raet1eQ9CZQ6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Raet1eQ9CZQ6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Raet1eQ9CZQ6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Raet1eQ9CZQ6 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.76■□□□□ 0.59
Raet1eQ9CZQ6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Raet1eQ9CZQ6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Raet1eQ9CZQ6 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.74■□□□□ 0.59
Raet1eQ9CZQ6 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.74■□□□□ 0.59
Raet1eQ9CZQ6 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms