Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdh15Q99PJ1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.24■■□□□ 1.63
Pcdh15Q99PJ1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdh15Q99PJ1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC25.23■■□□□ 1.63
Pcdh15Q99PJ1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
Pcdh15Q99PJ1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC25.23■■□□□ 1.63
Pcdh15Q99PJ1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Pcdh15Q99PJ1 Gm29257-201ENSMUST00000186115 639 ntBASIC25.22■■□□□ 1.63
Pcdh15Q99PJ1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdh15Q99PJ1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdh15Q99PJ1 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdh15Q99PJ1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdh15Q99PJ1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Pcdh15Q99PJ1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
Pcdh15Q99PJ1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Pcdh15Q99PJ1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Pcdh15Q99PJ1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC25.19■■□□□ 1.62
Pcdh15Q99PJ1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC25.19■■□□□ 1.62
Pcdh15Q99PJ1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdh15Q99PJ1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC25.18■■□□□ 1.62
Pcdh15Q99PJ1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Pcdh15Q99PJ1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Pcdh15Q99PJ1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC25.18■■□□□ 1.62
Pcdh15Q99PJ1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC25.18■■□□□ 1.62
Pcdh15Q99PJ1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC25.18■■□□□ 1.62
Pcdh15Q99PJ1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Pcdh15Q99PJ1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Pcdh15Q99PJ1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC25.17■■□□□ 1.62
Pcdh15Q99PJ1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC25.17■■□□□ 1.62
Pcdh15Q99PJ1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdh15Q99PJ1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdh15Q99PJ1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdh15Q99PJ1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
Pcdh15Q99PJ1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdh15Q99PJ1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdh15Q99PJ1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdh15Q99PJ1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdh15Q99PJ1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdh15Q99PJ1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Pcdh15Q99PJ1 Gm10620-201ENSMUST00000098379 1332 ntBASIC25.15■■□□□ 1.62
Pcdh15Q99PJ1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC25.15■■□□□ 1.62
Pcdh15Q99PJ1 AC164629.5-201ENSMUST00000220387 632 ntBASIC25.14■■□□□ 1.62
Pcdh15Q99PJ1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdh15Q99PJ1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdh15Q99PJ1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdh15Q99PJ1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdh15Q99PJ1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdh15Q99PJ1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdh15Q99PJ1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Pcdh15Q99PJ1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
Pcdh15Q99PJ1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Pcdh15Q99PJ1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.14■■□□□ 1.61
Pcdh15Q99PJ1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Pcdh15Q99PJ1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdh15Q99PJ1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdh15Q99PJ1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Pcdh15Q99PJ1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdh15Q99PJ1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
Pcdh15Q99PJ1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdh15Q99PJ1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.12■■□□□ 1.61
Pcdh15Q99PJ1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC25.12■■□□□ 1.61
Pcdh15Q99PJ1 Gm6139-201ENSMUST00000079261 882 ntBASIC25.12■■□□□ 1.61
Pcdh15Q99PJ1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Pcdh15Q99PJ1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdh15Q99PJ1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdh15Q99PJ1 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdh15Q99PJ1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdh15Q99PJ1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdh15Q99PJ1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
Pcdh15Q99PJ1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Pcdh15Q99PJ1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdh15Q99PJ1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdh15Q99PJ1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdh15Q99PJ1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdh15Q99PJ1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC25.1■■□□□ 1.61
Pcdh15Q99PJ1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdh15Q99PJ1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdh15Q99PJ1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC25.1■■□□□ 1.61
Pcdh15Q99PJ1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
Pcdh15Q99PJ1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdh15Q99PJ1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
Pcdh15Q99PJ1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdh15Q99PJ1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
Pcdh15Q99PJ1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC25.09■■□□□ 1.61
Pcdh15Q99PJ1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdh15Q99PJ1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
Pcdh15Q99PJ1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC25.08■■□□□ 1.61
Pcdh15Q99PJ1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC25.08■■□□□ 1.6
Pcdh15Q99PJ1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
Pcdh15Q99PJ1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdh15Q99PJ1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdh15Q99PJ1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC25.07■■□□□ 1.6
Pcdh15Q99PJ1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pcdh15Q99PJ1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC25.06■■□□□ 1.6
Pcdh15Q99PJ1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC25.06■■□□□ 1.6
Pcdh15Q99PJ1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdh15Q99PJ1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdh15Q99PJ1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
Pcdh15Q99PJ1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdh15Q99PJ1 Gm43017-201ENSMUST00000198296 752 ntBASIC25.04■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms