Protein–RNA interactions for Protein: Q99JP6

Homer3, Homer protein homolog 3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Homer3Q99JP6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
Homer3Q99JP6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Homer3Q99JP6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Homer3Q99JP6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Homer3Q99JP6 Gm11599-201ENSMUST00000118720 878 ntBASIC21.34■■□□□ 1.01
Homer3Q99JP6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.34■■□□□ 1.01
Homer3Q99JP6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Homer3Q99JP6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Homer3Q99JP6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Homer3Q99JP6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Homer3Q99JP6 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.33■■□□□ 1.01
Homer3Q99JP6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.33■■□□□ 1.01
Homer3Q99JP6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Homer3Q99JP6 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.33■■□□□ 1.01
Homer3Q99JP6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Homer3Q99JP6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.32■■□□□ 1
Homer3Q99JP6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Homer3Q99JP6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Homer3Q99JP6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Homer3Q99JP6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Homer3Q99JP6 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Homer3Q99JP6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.31■■□□□ 1
Homer3Q99JP6 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Homer3Q99JP6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Homer3Q99JP6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.3■■□□□ 1
Homer3Q99JP6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.3■■□□□ 1
Homer3Q99JP6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.3■■□□□ 1
Homer3Q99JP6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Homer3Q99JP6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Homer3Q99JP6 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.3■■□□□ 1
Homer3Q99JP6 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Homer3Q99JP6 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Homer3Q99JP6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
Homer3Q99JP6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Homer3Q99JP6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Homer3Q99JP6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.29■■□□□ 1
Homer3Q99JP6 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Homer3Q99JP6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Homer3Q99JP6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.28■■□□□ 1
Homer3Q99JP6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Homer3Q99JP6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Homer3Q99JP6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Homer3Q99JP6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Homer3Q99JP6 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Homer3Q99JP6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.27■■□□□ 1
Homer3Q99JP6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Homer3Q99JP6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Homer3Q99JP6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Homer3Q99JP6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Homer3Q99JP6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Homer3Q99JP6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Homer3Q99JP6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Homer3Q99JP6 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Homer3Q99JP6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Homer3Q99JP6 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Homer3Q99JP6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Homer3Q99JP6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Homer3Q99JP6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Homer3Q99JP6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
Homer3Q99JP6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Homer3Q99JP6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.24■□□□□ 0.99
Homer3Q99JP6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Homer3Q99JP6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
Homer3Q99JP6 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Homer3Q99JP6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.24■□□□□ 0.99
Homer3Q99JP6 Gm44428-201ENSMUST00000204474 874 ntBASIC21.24■□□□□ 0.99
Homer3Q99JP6 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Homer3Q99JP6 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Homer3Q99JP6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Homer3Q99JP6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Homer3Q99JP6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Homer3Q99JP6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Homer3Q99JP6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Homer3Q99JP6 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Homer3Q99JP6 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Homer3Q99JP6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Homer3Q99JP6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Homer3Q99JP6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Homer3Q99JP6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Homer3Q99JP6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Homer3Q99JP6 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Homer3Q99JP6 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.22■□□□□ 0.99
Homer3Q99JP6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
Homer3Q99JP6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Homer3Q99JP6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Homer3Q99JP6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Homer3Q99JP6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Homer3Q99JP6 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Homer3Q99JP6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Homer3Q99JP6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Homer3Q99JP6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Homer3Q99JP6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Homer3Q99JP6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Homer3Q99JP6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Homer3Q99JP6 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Homer3Q99JP6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Homer3Q99JP6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Homer3Q99JP6 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Homer3Q99JP6 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Homer3Q99JP6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms