Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Thumpd1Q99J36 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Thumpd1Q99J36 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Thumpd1Q99J36 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Thumpd1Q99J36 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Thumpd1Q99J36 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Thumpd1Q99J36 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Thumpd1Q99J36 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Thumpd1Q99J36 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Thumpd1Q99J36 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Thumpd1Q99J36 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Thumpd1Q99J36 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.11■□□□□ 0.65
Thumpd1Q99J36 Gm45364-201ENSMUST00000210883 159 ntBASIC19.11■□□□□ 0.65
Thumpd1Q99J36 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Thumpd1Q99J36 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Thumpd1Q99J36 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.11■□□□□ 0.65
Thumpd1Q99J36 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Thumpd1Q99J36 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Thumpd1Q99J36 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Thumpd1Q99J36 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Thumpd1Q99J36 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Thumpd1Q99J36 Gm8503-201ENSMUST00000118131 455 ntBASIC19.09■□□□□ 0.65
Thumpd1Q99J36 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Thumpd1Q99J36 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Thumpd1Q99J36 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Thumpd1Q99J36 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Thumpd1Q99J36 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Thumpd1Q99J36 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Thumpd1Q99J36 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Thumpd1Q99J36 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.08■□□□□ 0.64
Thumpd1Q99J36 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.08■□□□□ 0.64
Thumpd1Q99J36 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Thumpd1Q99J36 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Thumpd1Q99J36 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Thumpd1Q99J36 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Thumpd1Q99J36 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Thumpd1Q99J36 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Thumpd1Q99J36 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Thumpd1Q99J36 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Thumpd1Q99J36 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Thumpd1Q99J36 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Thumpd1Q99J36 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Thumpd1Q99J36 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.07■□□□□ 0.64
Thumpd1Q99J36 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Thumpd1Q99J36 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Thumpd1Q99J36 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.07■□□□□ 0.64
Thumpd1Q99J36 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Thumpd1Q99J36 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Thumpd1Q99J36 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Thumpd1Q99J36 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Thumpd1Q99J36 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.06■□□□□ 0.64
Thumpd1Q99J36 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Thumpd1Q99J36 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Thumpd1Q99J36 Notumos-201ENSMUST00000151998 2659 ntBASIC19.06■□□□□ 0.64
Thumpd1Q99J36 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Thumpd1Q99J36 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Thumpd1Q99J36 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Thumpd1Q99J36 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Thumpd1Q99J36 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Thumpd1Q99J36 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Thumpd1Q99J36 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.05■□□□□ 0.64
Thumpd1Q99J36 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Thumpd1Q99J36 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Thumpd1Q99J36 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.04■□□□□ 0.64
Thumpd1Q99J36 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Thumpd1Q99J36 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Thumpd1Q99J36 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Thumpd1Q99J36 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Thumpd1Q99J36 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Thumpd1Q99J36 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Thumpd1Q99J36 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Thumpd1Q99J36 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.03■□□□□ 0.64
Thumpd1Q99J36 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Thumpd1Q99J36 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.03■□□□□ 0.64
Thumpd1Q99J36 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Thumpd1Q99J36 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Thumpd1Q99J36 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Thumpd1Q99J36 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Thumpd1Q99J36 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Thumpd1Q99J36 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Thumpd1Q99J36 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Thumpd1Q99J36 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Thumpd1Q99J36 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Thumpd1Q99J36 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Thumpd1Q99J36 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Thumpd1Q99J36 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Thumpd1Q99J36 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Thumpd1Q99J36 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Thumpd1Q99J36 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Thumpd1Q99J36 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Thumpd1Q99J36 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Thumpd1Q99J36 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19■□□□□ 0.63
Thumpd1Q99J36 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19■□□□□ 0.63
Thumpd1Q99J36 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19■□□□□ 0.63
Thumpd1Q99J36 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Thumpd1Q99J36 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.99■□□□□ 0.63
Thumpd1Q99J36 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Thumpd1Q99J36 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Thumpd1Q99J36 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Thumpd1Q99J36 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms