Protein–RNA interactions for Protein: Q91Y14

Pcdha6, Pcdha6 protein, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha6Q91Y14 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.43■■□□□ 1.02
Pcdha6Q91Y14 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha6Q91Y14 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha6Q91Y14 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha6Q91Y14 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha6Q91Y14 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Pcdha6Q91Y14 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha6Q91Y14 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Pcdha6Q91Y14 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdha6Q91Y14 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Pcdha6Q91Y14 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdha6Q91Y14 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdha6Q91Y14 Gm14523-201ENSMUST00000117260 558 ntBASIC21.41■■□□□ 1.02
Pcdha6Q91Y14 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdha6Q91Y14 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdha6Q91Y14 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.41■■□□□ 1.02
Pcdha6Q91Y14 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdha6Q91Y14 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdha6Q91Y14 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdha6Q91Y14 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdha6Q91Y14 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdha6Q91Y14 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdha6Q91Y14 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdha6Q91Y14 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdha6Q91Y14 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdha6Q91Y14 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
Pcdha6Q91Y14 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.38■■□□□ 1.01
Pcdha6Q91Y14 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdha6Q91Y14 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdha6Q91Y14 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdha6Q91Y14 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.38■■□□□ 1.01
Pcdha6Q91Y14 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdha6Q91Y14 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdha6Q91Y14 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdha6Q91Y14 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdha6Q91Y14 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdha6Q91Y14 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.37■■□□□ 1.01
Pcdha6Q91Y14 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdha6Q91Y14 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.37■■□□□ 1.01
Pcdha6Q91Y14 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.37■■□□□ 1.01
Pcdha6Q91Y14 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdha6Q91Y14 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdha6Q91Y14 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdha6Q91Y14 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdha6Q91Y14 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdha6Q91Y14 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdha6Q91Y14 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdha6Q91Y14 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdha6Q91Y14 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.36■■□□□ 1.01
Pcdha6Q91Y14 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdha6Q91Y14 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdha6Q91Y14 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdha6Q91Y14 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdha6Q91Y14 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdha6Q91Y14 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdha6Q91Y14 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdha6Q91Y14 Gm7332-201ENSMUST00000118351 454 ntBASIC21.35■■□□□ 1.01
Pcdha6Q91Y14 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdha6Q91Y14 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdha6Q91Y14 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha6Q91Y14 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha6Q91Y14 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha6Q91Y14 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.34■■□□□ 1.01
Pcdha6Q91Y14 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha6Q91Y14 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha6Q91Y14 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha6Q91Y14 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha6Q91Y14 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha6Q91Y14 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha6Q91Y14 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha6Q91Y14 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Pcdha6Q91Y14 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdha6Q91Y14 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Pcdha6Q91Y14 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdha6Q91Y14 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdha6Q91Y14 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Pcdha6Q91Y14 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdha6Q91Y14 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.32■■□□□ 1
Pcdha6Q91Y14 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdha6Q91Y14 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Pcdha6Q91Y14 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdha6Q91Y14 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.32■■□□□ 1
Pcdha6Q91Y14 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdha6Q91Y14 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.32■■□□□ 1
Pcdha6Q91Y14 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdha6Q91Y14 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.31■■□□□ 1
Pcdha6Q91Y14 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdha6Q91Y14 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdha6Q91Y14 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdha6Q91Y14 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.31■■□□□ 1
Pcdha6Q91Y14 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdha6Q91Y14 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.31■■□□□ 1
Pcdha6Q91Y14 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdha6Q91Y14 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Pcdha6Q91Y14 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.3■■□□□ 1
Pcdha6Q91Y14 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.3■■□□□ 1
Pcdha6Q91Y14 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.3■■□□□ 1
Pcdha6Q91Y14 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.3■■□□□ 1
Pcdha6Q91Y14 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdha6Q91Y14 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms