Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.37■■□□□ 1.17
Pcdhb1Q91Y08 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
Pcdhb1Q91Y08 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb1Q91Y08 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb1Q91Y08 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Pcdhb1Q91Y08 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb1Q91Y08 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb1Q91Y08 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb1Q91Y08 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb1Q91Y08 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Pcdhb1Q91Y08 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb1Q91Y08 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Pcdhb1Q91Y08 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb1Q91Y08 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.36■■□□□ 1.17
Pcdhb1Q91Y08 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb1Q91Y08 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.35■■□□□ 1.17
Pcdhb1Q91Y08 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb1Q91Y08 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb1Q91Y08 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb1Q91Y08 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb1Q91Y08 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb1Q91Y08 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.35■■□□□ 1.17
Pcdhb1Q91Y08 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb1Q91Y08 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.34■■□□□ 1.17
Pcdhb1Q91Y08 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Pcdhb1Q91Y08 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.34■■□□□ 1.17
Pcdhb1Q91Y08 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Pcdhb1Q91Y08 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb1Q91Y08 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb1Q91Y08 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb1Q91Y08 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb1Q91Y08 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb1Q91Y08 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.33■■□□□ 1.17
Pcdhb1Q91Y08 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb1Q91Y08 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Pcdhb1Q91Y08 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb1Q91Y08 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
Pcdhb1Q91Y08 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.32■■□□□ 1.16
Pcdhb1Q91Y08 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb1Q91Y08 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb1Q91Y08 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb1Q91Y08 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC22.32■■□□□ 1.16
Pcdhb1Q91Y08 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Pcdhb1Q91Y08 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb1Q91Y08 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb1Q91Y08 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb1Q91Y08 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb1Q91Y08 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Pcdhb1Q91Y08 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb1Q91Y08 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb1Q91Y08 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC22.31■■□□□ 1.16
Pcdhb1Q91Y08 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb1Q91Y08 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb1Q91Y08 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb1Q91Y08 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb1Q91Y08 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb1Q91Y08 Cap2-205ENSMUST00000225824 1634 ntBASIC22.31■■□□□ 1.16
Pcdhb1Q91Y08 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb1Q91Y08 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb1Q91Y08 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb1Q91Y08 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.3■■□□□ 1.16
Pcdhb1Q91Y08 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.3■■□□□ 1.16
Pcdhb1Q91Y08 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb1Q91Y08 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb1Q91Y08 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Pcdhb1Q91Y08 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Pcdhb1Q91Y08 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb1Q91Y08 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb1Q91Y08 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb1Q91Y08 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb1Q91Y08 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.28■■□□□ 1.16
Pcdhb1Q91Y08 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb1Q91Y08 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb1Q91Y08 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
Pcdhb1Q91Y08 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb1Q91Y08 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb1Q91Y08 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.27■■□□□ 1.16
Pcdhb1Q91Y08 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC22.27■■□□□ 1.16
Pcdhb1Q91Y08 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC22.27■■□□□ 1.16
Pcdhb1Q91Y08 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb1Q91Y08 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb1Q91Y08 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.27■■□□□ 1.16
Pcdhb1Q91Y08 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb1Q91Y08 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb1Q91Y08 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Pcdhb1Q91Y08 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.25■■□□□ 1.15
Pcdhb1Q91Y08 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhb1Q91Y08 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Pcdhb1Q91Y08 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC22.25■■□□□ 1.15
Pcdhb1Q91Y08 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC22.25■■□□□ 1.15
Pcdhb1Q91Y08 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb1Q91Y08 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb1Q91Y08 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Pcdhb1Q91Y08 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb1Q91Y08 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb1Q91Y08 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb1Q91Y08 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb1Q91Y08 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb1Q91Y08 Gm42418-201ENSMUST00000182010 1831 ntBASIC22.23■■□□□ 1.15
Pcdhb1Q91Y08 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms