Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdhb22Q91XZ8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC25.21■■□□□ 1.63
Pcdhb22Q91XZ8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC25.21■■□□□ 1.63
Pcdhb22Q91XZ8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdhb22Q91XZ8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdhb22Q91XZ8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC25.21■■□□□ 1.63
Pcdhb22Q91XZ8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdhb22Q91XZ8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
Pcdhb22Q91XZ8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdhb22Q91XZ8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdhb22Q91XZ8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
Pcdhb22Q91XZ8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC25.2■■□□□ 1.62
Pcdhb22Q91XZ8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Pcdhb22Q91XZ8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Pcdhb22Q91XZ8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Pcdhb22Q91XZ8 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhb22Q91XZ8 Gm13238-201ENSMUST00000117655 780 ntBASIC25.19■■□□□ 1.62
Pcdhb22Q91XZ8 Gm43566-201ENSMUST00000196851 808 ntBASIC25.19■■□□□ 1.62
Pcdhb22Q91XZ8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhb22Q91XZ8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhb22Q91XZ8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhb22Q91XZ8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Pcdhb22Q91XZ8 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC25.18■■□□□ 1.62
Pcdhb22Q91XZ8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Pcdhb22Q91XZ8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Pcdhb22Q91XZ8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
Pcdhb22Q91XZ8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdhb22Q91XZ8 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdhb22Q91XZ8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdhb22Q91XZ8 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdhb22Q91XZ8 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
Pcdhb22Q91XZ8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC25.16■■□□□ 1.62
Pcdhb22Q91XZ8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdhb22Q91XZ8 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Pcdhb22Q91XZ8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC25.15■■□□□ 1.62
Pcdhb22Q91XZ8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Pcdhb22Q91XZ8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Pcdhb22Q91XZ8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Pcdhb22Q91XZ8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
Pcdhb22Q91XZ8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Pcdhb22Q91XZ8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Pcdhb22Q91XZ8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC25.15■■□□□ 1.62
Pcdhb22Q91XZ8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Pcdhb22Q91XZ8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC25.14■■□□□ 1.62
Pcdhb22Q91XZ8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdhb22Q91XZ8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.61
Pcdhb22Q91XZ8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdhb22Q91XZ8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdhb22Q91XZ8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC25.13■■□□□ 1.61
Pcdhb22Q91XZ8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Pcdhb22Q91XZ8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdhb22Q91XZ8 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdhb22Q91XZ8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdhb22Q91XZ8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdhb22Q91XZ8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC25.12■■□□□ 1.61
Pcdhb22Q91XZ8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC25.11■■□□□ 1.61
Pcdhb22Q91XZ8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdhb22Q91XZ8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC25.11■■□□□ 1.61
Pcdhb22Q91XZ8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhb22Q91XZ8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhb22Q91XZ8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhb22Q91XZ8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhb22Q91XZ8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC25.1■■□□□ 1.61
Pcdhb22Q91XZ8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhb22Q91XZ8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhb22Q91XZ8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdhb22Q91XZ8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdhb22Q91XZ8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Pcdhb22Q91XZ8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Pcdhb22Q91XZ8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Pcdhb22Q91XZ8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Pcdhb22Q91XZ8 Gm28536-201ENSMUST00000190971 1317 ntBASIC25.08■■□□□ 1.6
Pcdhb22Q91XZ8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.6
Pcdhb22Q91XZ8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
Pcdhb22Q91XZ8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhb22Q91XZ8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC25.07■■□□□ 1.6
Pcdhb22Q91XZ8 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhb22Q91XZ8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhb22Q91XZ8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhb22Q91XZ8 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhb22Q91XZ8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pcdhb22Q91XZ8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC25.06■■□□□ 1.6
Pcdhb22Q91XZ8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pcdhb22Q91XZ8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdhb22Q91XZ8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC25.05■■□□□ 1.6
Pcdhb22Q91XZ8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdhb22Q91XZ8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Pcdhb22Q91XZ8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdhb22Q91XZ8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdhb22Q91XZ8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC25.04■■□□□ 1.6
Pcdhb22Q91XZ8 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdhb22Q91XZ8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC25.04■■□□□ 1.6
Pcdhb22Q91XZ8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
Pcdhb22Q91XZ8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdhb22Q91XZ8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhb22Q91XZ8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhb22Q91XZ8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhb22Q91XZ8 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
Pcdhb22Q91XZ8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhb22Q91XZ8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms