Protein–RNA interactions for Protein: Q8VCZ8

Rpusd1, RNA pseudouridylate synthase domain-containing protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd1Q8VCZ8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Rpusd1Q8VCZ8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rpusd1Q8VCZ8 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.69■□□□□ 0.9
Rpusd1Q8VCZ8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpusd1Q8VCZ8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpusd1Q8VCZ8 Gm22238-201ENSMUST00000175222 88 ntBASIC20.69■□□□□ 0.9
Rpusd1Q8VCZ8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.69■□□□□ 0.9
Rpusd1Q8VCZ8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpusd1Q8VCZ8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpusd1Q8VCZ8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rpusd1Q8VCZ8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Rpusd1Q8VCZ8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
Rpusd1Q8VCZ8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpusd1Q8VCZ8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpusd1Q8VCZ8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.69■□□□□ 0.9
Rpusd1Q8VCZ8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rpusd1Q8VCZ8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpusd1Q8VCZ8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rpusd1Q8VCZ8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Rpusd1Q8VCZ8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpusd1Q8VCZ8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Rpusd1Q8VCZ8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpusd1Q8VCZ8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpusd1Q8VCZ8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.66■□□□□ 0.9
Rpusd1Q8VCZ8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rpusd1Q8VCZ8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpusd1Q8VCZ8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.66■□□□□ 0.9
Rpusd1Q8VCZ8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rpusd1Q8VCZ8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.66■□□□□ 0.9
Rpusd1Q8VCZ8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpusd1Q8VCZ8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpusd1Q8VCZ8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpusd1Q8VCZ8 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpusd1Q8VCZ8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpusd1Q8VCZ8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpusd1Q8VCZ8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Rpusd1Q8VCZ8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rpusd1Q8VCZ8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rpusd1Q8VCZ8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rpusd1Q8VCZ8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rpusd1Q8VCZ8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Rpusd1Q8VCZ8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rpusd1Q8VCZ8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rpusd1Q8VCZ8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Rpusd1Q8VCZ8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rpusd1Q8VCZ8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpusd1Q8VCZ8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Rpusd1Q8VCZ8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpusd1Q8VCZ8 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpusd1Q8VCZ8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpusd1Q8VCZ8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.62■□□□□ 0.89
Rpusd1Q8VCZ8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpusd1Q8VCZ8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpusd1Q8VCZ8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.62■□□□□ 0.89
Rpusd1Q8VCZ8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpusd1Q8VCZ8 Gm13241-201ENSMUST00000094493 780 ntBASIC20.62■□□□□ 0.89
Rpusd1Q8VCZ8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpusd1Q8VCZ8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpusd1Q8VCZ8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpusd1Q8VCZ8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpusd1Q8VCZ8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpusd1Q8VCZ8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpusd1Q8VCZ8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rpusd1Q8VCZ8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
Rpusd1Q8VCZ8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpusd1Q8VCZ8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpusd1Q8VCZ8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpusd1Q8VCZ8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rpusd1Q8VCZ8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rpusd1Q8VCZ8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Rpusd1Q8VCZ8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpusd1Q8VCZ8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpusd1Q8VCZ8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rpusd1Q8VCZ8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Rpusd1Q8VCZ8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpusd1Q8VCZ8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rpusd1Q8VCZ8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.59■□□□□ 0.89
Rpusd1Q8VCZ8 Gm9847-201ENSMUST00000052528 599 ntBASIC20.59■□□□□ 0.89
Rpusd1Q8VCZ8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpusd1Q8VCZ8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rpusd1Q8VCZ8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rpusd1Q8VCZ8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rpusd1Q8VCZ8 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpusd1Q8VCZ8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rpusd1Q8VCZ8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpusd1Q8VCZ8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
Rpusd1Q8VCZ8 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpusd1Q8VCZ8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Rpusd1Q8VCZ8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rpusd1Q8VCZ8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpusd1Q8VCZ8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpusd1Q8VCZ8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rpusd1Q8VCZ8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.55■□□□□ 0.88
Rpusd1Q8VCZ8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rpusd1Q8VCZ8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpusd1Q8VCZ8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rpusd1Q8VCZ8 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.55■□□□□ 0.88
Rpusd1Q8VCZ8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpusd1Q8VCZ8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpusd1Q8VCZ8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms