Protein–RNA interactions for Protein: Q8R2U7

Lrrc42, Leucine-rich repeat-containing protein 42, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc42Q8R2U7 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Lrrc42Q8R2U7 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.27■■□□□ 1.16
Lrrc42Q8R2U7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Lrrc42Q8R2U7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC22.26■■□□□ 1.15
Lrrc42Q8R2U7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lrrc42Q8R2U7 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lrrc42Q8R2U7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lrrc42Q8R2U7 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Lrrc42Q8R2U7 Gm10420-201ENSMUST00000121713 882 ntBASIC22.26■■□□□ 1.15
Lrrc42Q8R2U7 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lrrc42Q8R2U7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lrrc42Q8R2U7 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lrrc42Q8R2U7 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lrrc42Q8R2U7 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lrrc42Q8R2U7 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lrrc42Q8R2U7 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Lrrc42Q8R2U7 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Lrrc42Q8R2U7 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Lrrc42Q8R2U7 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.24■■□□□ 1.15
Lrrc42Q8R2U7 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Lrrc42Q8R2U7 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Lrrc42Q8R2U7 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Lrrc42Q8R2U7 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Lrrc42Q8R2U7 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Lrrc42Q8R2U7 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Lrrc42Q8R2U7 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Lrrc42Q8R2U7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Lrrc42Q8R2U7 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Lrrc42Q8R2U7 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.23■■□□□ 1.15
Lrrc42Q8R2U7 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.22■■□□□ 1.15
Lrrc42Q8R2U7 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Lrrc42Q8R2U7 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lrrc42Q8R2U7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.21■■□□□ 1.15
Lrrc42Q8R2U7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Lrrc42Q8R2U7 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.2■■□□□ 1.14
Lrrc42Q8R2U7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Lrrc42Q8R2U7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.2■■□□□ 1.14
Lrrc42Q8R2U7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Lrrc42Q8R2U7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Lrrc42Q8R2U7 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Lrrc42Q8R2U7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Lrrc42Q8R2U7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Lrrc42Q8R2U7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Lrrc42Q8R2U7 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Lrrc42Q8R2U7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
Lrrc42Q8R2U7 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Lrrc42Q8R2U7 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Lrrc42Q8R2U7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Lrrc42Q8R2U7 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Lrrc42Q8R2U7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC22.18■■□□□ 1.14
Lrrc42Q8R2U7 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Lrrc42Q8R2U7 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Lrrc42Q8R2U7 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Lrrc42Q8R2U7 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
Lrrc42Q8R2U7 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.14
Lrrc42Q8R2U7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lrrc42Q8R2U7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lrrc42Q8R2U7 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Lrrc42Q8R2U7 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lrrc42Q8R2U7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Lrrc42Q8R2U7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lrrc42Q8R2U7 Gm37415-201ENSMUST00000192265 2054 ntBASIC22.17■■□□□ 1.14
Lrrc42Q8R2U7 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lrrc42Q8R2U7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Lrrc42Q8R2U7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lrrc42Q8R2U7 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lrrc42Q8R2U7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Lrrc42Q8R2U7 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lrrc42Q8R2U7 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lrrc42Q8R2U7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lrrc42Q8R2U7 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lrrc42Q8R2U7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Lrrc42Q8R2U7 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lrrc42Q8R2U7 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lrrc42Q8R2U7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lrrc42Q8R2U7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lrrc42Q8R2U7 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lrrc42Q8R2U7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lrrc42Q8R2U7 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lrrc42Q8R2U7 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lrrc42Q8R2U7 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Lrrc42Q8R2U7 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
Lrrc42Q8R2U7 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Lrrc42Q8R2U7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lrrc42Q8R2U7 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lrrc42Q8R2U7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lrrc42Q8R2U7 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Lrrc42Q8R2U7 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lrrc42Q8R2U7 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lrrc42Q8R2U7 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lrrc42Q8R2U7 Gm10616-201ENSMUST00000205285 2127 ntBASIC22.12■■□□□ 1.13
Lrrc42Q8R2U7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Lrrc42Q8R2U7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Lrrc42Q8R2U7 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Lrrc42Q8R2U7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Lrrc42Q8R2U7 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lrrc42Q8R2U7 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lrrc42Q8R2U7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC22.11■■□□□ 1.13
Lrrc42Q8R2U7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lrrc42Q8R2U7 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms