Protein–RNA interactions for Protein: Q8R1U2

Cgref1, Cell growth regulator with EF hand domain protein 1, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cgref1Q8R1U2 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cgref1Q8R1U2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cgref1Q8R1U2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cgref1Q8R1U2 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.65■■□□□ 1.06
Cgref1Q8R1U2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.65■■□□□ 1.06
Cgref1Q8R1U2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Cgref1Q8R1U2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cgref1Q8R1U2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Cgref1Q8R1U2 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Cgref1Q8R1U2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cgref1Q8R1U2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cgref1Q8R1U2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cgref1Q8R1U2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cgref1Q8R1U2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.63■■□□□ 1.05
Cgref1Q8R1U2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Cgref1Q8R1U2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cgref1Q8R1U2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Cgref1Q8R1U2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cgref1Q8R1U2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cgref1Q8R1U2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cgref1Q8R1U2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
Cgref1Q8R1U2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.62■■□□□ 1.05
Cgref1Q8R1U2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cgref1Q8R1U2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cgref1Q8R1U2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cgref1Q8R1U2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cgref1Q8R1U2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cgref1Q8R1U2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.61■■□□□ 1.05
Cgref1Q8R1U2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cgref1Q8R1U2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cgref1Q8R1U2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cgref1Q8R1U2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cgref1Q8R1U2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cgref1Q8R1U2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cgref1Q8R1U2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Cgref1Q8R1U2 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cgref1Q8R1U2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cgref1Q8R1U2 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cgref1Q8R1U2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Cgref1Q8R1U2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Cgref1Q8R1U2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Cgref1Q8R1U2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cgref1Q8R1U2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.57■■□□□ 1.04
Cgref1Q8R1U2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cgref1Q8R1U2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cgref1Q8R1U2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cgref1Q8R1U2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cgref1Q8R1U2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.57■■□□□ 1.04
Cgref1Q8R1U2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cgref1Q8R1U2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cgref1Q8R1U2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cgref1Q8R1U2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cgref1Q8R1U2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cgref1Q8R1U2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.56■■□□□ 1.04
Cgref1Q8R1U2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.56■■□□□ 1.04
Cgref1Q8R1U2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cgref1Q8R1U2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cgref1Q8R1U2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Cgref1Q8R1U2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cgref1Q8R1U2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cgref1Q8R1U2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cgref1Q8R1U2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cgref1Q8R1U2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cgref1Q8R1U2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.55■■□□□ 1.04
Cgref1Q8R1U2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.55■■□□□ 1.04
Cgref1Q8R1U2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cgref1Q8R1U2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cgref1Q8R1U2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cgref1Q8R1U2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cgref1Q8R1U2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.54■■□□□ 1.04
Cgref1Q8R1U2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cgref1Q8R1U2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cgref1Q8R1U2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cgref1Q8R1U2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cgref1Q8R1U2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.52■■□□□ 1.04
Cgref1Q8R1U2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Cgref1Q8R1U2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cgref1Q8R1U2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cgref1Q8R1U2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cgref1Q8R1U2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cgref1Q8R1U2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cgref1Q8R1U2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cgref1Q8R1U2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Cgref1Q8R1U2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cgref1Q8R1U2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cgref1Q8R1U2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.52■■□□□ 1.03
Cgref1Q8R1U2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
Cgref1Q8R1U2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cgref1Q8R1U2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.51■■□□□ 1.03
Cgref1Q8R1U2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Cgref1Q8R1U2 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Cgref1Q8R1U2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Cgref1Q8R1U2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cgref1Q8R1U2 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cgref1Q8R1U2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cgref1Q8R1U2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cgref1Q8R1U2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cgref1Q8R1U2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cgref1Q8R1U2 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cgref1Q8R1U2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms