Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Alms1Q8K4E0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Alms1Q8K4E0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Alms1Q8K4E0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Alms1Q8K4E0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
Alms1Q8K4E0 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Alms1Q8K4E0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Alms1Q8K4E0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Alms1Q8K4E0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.2■□□□□ 0.98
Alms1Q8K4E0 Gm40881-201ENSMUST00000223397 166 ntBASIC21.2■□□□□ 0.98
Alms1Q8K4E0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Alms1Q8K4E0 Golgb1-201ENSMUST00000023534 498 ntBASIC21.19■□□□□ 0.98
Alms1Q8K4E0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Alms1Q8K4E0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Alms1Q8K4E0 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Alms1Q8K4E0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Alms1Q8K4E0 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Alms1Q8K4E0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Alms1Q8K4E0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Alms1Q8K4E0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Alms1Q8K4E0 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.18■□□□□ 0.98
Alms1Q8K4E0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Alms1Q8K4E0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Alms1Q8K4E0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Alms1Q8K4E0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.18■□□□□ 0.98
Alms1Q8K4E0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Alms1Q8K4E0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Alms1Q8K4E0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Alms1Q8K4E0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Alms1Q8K4E0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.17■□□□□ 0.98
Alms1Q8K4E0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Alms1Q8K4E0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Alms1Q8K4E0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Alms1Q8K4E0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.16■□□□□ 0.98
Alms1Q8K4E0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Alms1Q8K4E0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Alms1Q8K4E0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Alms1Q8K4E0 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.16■□□□□ 0.98
Alms1Q8K4E0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Alms1Q8K4E0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.16■□□□□ 0.98
Alms1Q8K4E0 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.16■□□□□ 0.98
Alms1Q8K4E0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.15■□□□□ 0.98
Alms1Q8K4E0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Alms1Q8K4E0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Alms1Q8K4E0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Alms1Q8K4E0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Alms1Q8K4E0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Alms1Q8K4E0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Alms1Q8K4E0 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.14■□□□□ 0.98
Alms1Q8K4E0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Alms1Q8K4E0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Alms1Q8K4E0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Alms1Q8K4E0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Alms1Q8K4E0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Alms1Q8K4E0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.13■□□□□ 0.97
Alms1Q8K4E0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Alms1Q8K4E0 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Alms1Q8K4E0 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Alms1Q8K4E0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Alms1Q8K4E0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Alms1Q8K4E0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Alms1Q8K4E0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Alms1Q8K4E0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Alms1Q8K4E0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.12■□□□□ 0.97
Alms1Q8K4E0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Alms1Q8K4E0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Alms1Q8K4E0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Alms1Q8K4E0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Alms1Q8K4E0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Alms1Q8K4E0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Alms1Q8K4E0 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Alms1Q8K4E0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.1■□□□□ 0.97
Alms1Q8K4E0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Alms1Q8K4E0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Alms1Q8K4E0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Alms1Q8K4E0 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.1■□□□□ 0.97
Alms1Q8K4E0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Alms1Q8K4E0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Alms1Q8K4E0 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Alms1Q8K4E0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Alms1Q8K4E0 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Alms1Q8K4E0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Alms1Q8K4E0 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Alms1Q8K4E0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Alms1Q8K4E0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Alms1Q8K4E0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Alms1Q8K4E0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Alms1Q8K4E0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.09■□□□□ 0.97
Alms1Q8K4E0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Alms1Q8K4E0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Alms1Q8K4E0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Alms1Q8K4E0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.08■□□□□ 0.96
Alms1Q8K4E0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Alms1Q8K4E0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.08■□□□□ 0.96
Alms1Q8K4E0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Alms1Q8K4E0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.07■□□□□ 0.96
Alms1Q8K4E0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Alms1Q8K4E0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Alms1Q8K4E0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Alms1Q8K4E0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms