Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
Rtn1Q8K0T0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Rtn1Q8K0T0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
Rtn1Q8K0T0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
Rtn1Q8K0T0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
Rtn1Q8K0T0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
Rtn1Q8K0T0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Rtn1Q8K0T0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Rtn1Q8K0T0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Rtn1Q8K0T0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC24.83■■□□□ 1.57
Rtn1Q8K0T0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC24.83■■□□□ 1.57
Rtn1Q8K0T0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Rtn1Q8K0T0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Rtn1Q8K0T0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Rtn1Q8K0T0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Rtn1Q8K0T0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Rtn1Q8K0T0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Rtn1Q8K0T0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Rtn1Q8K0T0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC24.82■■□□□ 1.56
Rtn1Q8K0T0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC24.82■■□□□ 1.56
Rtn1Q8K0T0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Rtn1Q8K0T0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Rtn1Q8K0T0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Rtn1Q8K0T0 Nsd1-203ENSMUST00000224156 1149 ntBASIC24.81■■□□□ 1.56
Rtn1Q8K0T0 Gm5921-201ENSMUST00000075898 882 ntBASIC24.81■■□□□ 1.56
Rtn1Q8K0T0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Rtn1Q8K0T0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC24.8■■□□□ 1.56
Rtn1Q8K0T0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC24.8■■□□□ 1.56
Rtn1Q8K0T0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Rtn1Q8K0T0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC24.8■■□□□ 1.56
Rtn1Q8K0T0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Rtn1Q8K0T0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Rtn1Q8K0T0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Rtn1Q8K0T0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Rtn1Q8K0T0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Rtn1Q8K0T0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
Rtn1Q8K0T0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Rtn1Q8K0T0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Rtn1Q8K0T0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Rtn1Q8K0T0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
Rtn1Q8K0T0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC24.79■■□□□ 1.56
Rtn1Q8K0T0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Rtn1Q8K0T0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Rtn1Q8K0T0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC24.78■■□□□ 1.56
Rtn1Q8K0T0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Rtn1Q8K0T0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Rtn1Q8K0T0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Rtn1Q8K0T0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
Rtn1Q8K0T0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC24.78■■□□□ 1.56
Rtn1Q8K0T0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Rtn1Q8K0T0 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Rtn1Q8K0T0 Gm17641-201ENSMUST00000166328 2350 ntBASIC24.77■■□□□ 1.56
Rtn1Q8K0T0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
Rtn1Q8K0T0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC24.76■■□□□ 1.55
Rtn1Q8K0T0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC24.76■■□□□ 1.55
Rtn1Q8K0T0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Rtn1Q8K0T0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rtn1Q8K0T0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rtn1Q8K0T0 Gm45444-201ENSMUST00000211394 898 ntBASIC24.75■■□□□ 1.55
Rtn1Q8K0T0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rtn1Q8K0T0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Rtn1Q8K0T0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rtn1Q8K0T0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Rtn1Q8K0T0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rtn1Q8K0T0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rtn1Q8K0T0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rtn1Q8K0T0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rtn1Q8K0T0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC24.74■■□□□ 1.55
Rtn1Q8K0T0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Rtn1Q8K0T0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC24.73■■□□□ 1.55
Rtn1Q8K0T0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Rtn1Q8K0T0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
Rtn1Q8K0T0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Rtn1Q8K0T0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC24.73■■□□□ 1.55
Rtn1Q8K0T0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
Rtn1Q8K0T0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Rtn1Q8K0T0 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Rtn1Q8K0T0 Gm13238-201ENSMUST00000117655 780 ntBASIC24.72■■□□□ 1.55
Rtn1Q8K0T0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
Rtn1Q8K0T0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Rtn1Q8K0T0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Rtn1Q8K0T0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rtn1Q8K0T0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rtn1Q8K0T0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rtn1Q8K0T0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rtn1Q8K0T0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rtn1Q8K0T0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
Rtn1Q8K0T0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC24.7■■□□□ 1.54
Rtn1Q8K0T0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC24.7■■□□□ 1.54
Rtn1Q8K0T0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC24.7■■□□□ 1.54
Rtn1Q8K0T0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Rtn1Q8K0T0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Rtn1Q8K0T0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC24.7■■□□□ 1.54
Rtn1Q8K0T0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Rtn1Q8K0T0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Rtn1Q8K0T0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Rtn1Q8K0T0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
Rtn1Q8K0T0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Rtn1Q8K0T0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Rtn1Q8K0T0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 260.6 ms