Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgcs1Q8JZK9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Hmgcs1Q8JZK9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgcs1Q8JZK9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgcs1Q8JZK9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.44■□□□□ 0.86
Hmgcs1Q8JZK9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hmgcs1Q8JZK9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hmgcs1Q8JZK9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hmgcs1Q8JZK9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hmgcs1Q8JZK9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.44■□□□□ 0.86
Hmgcs1Q8JZK9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hmgcs1Q8JZK9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hmgcs1Q8JZK9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgcs1Q8JZK9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgcs1Q8JZK9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgcs1Q8JZK9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.43■□□□□ 0.86
Hmgcs1Q8JZK9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hmgcs1Q8JZK9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Hmgcs1Q8JZK9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.42■□□□□ 0.86
Hmgcs1Q8JZK9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmgcs1Q8JZK9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmgcs1Q8JZK9 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hmgcs1Q8JZK9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmgcs1Q8JZK9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgcs1Q8JZK9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgcs1Q8JZK9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Hmgcs1Q8JZK9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hmgcs1Q8JZK9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Hmgcs1Q8JZK9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hmgcs1Q8JZK9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hmgcs1Q8JZK9 Gm27502-201ENSMUST00000183495 199 ntBASIC20.39■□□□□ 0.85
Hmgcs1Q8JZK9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hmgcs1Q8JZK9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hmgcs1Q8JZK9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hmgcs1Q8JZK9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hmgcs1Q8JZK9 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.38■□□□□ 0.85
Hmgcs1Q8JZK9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hmgcs1Q8JZK9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hmgcs1Q8JZK9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hmgcs1Q8JZK9 Gm11175-201ENSMUST00000116172 543 ntBASIC20.38■□□□□ 0.85
Hmgcs1Q8JZK9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.38■□□□□ 0.85
Hmgcs1Q8JZK9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hmgcs1Q8JZK9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hmgcs1Q8JZK9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Hmgcs1Q8JZK9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hmgcs1Q8JZK9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hmgcs1Q8JZK9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hmgcs1Q8JZK9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Hmgcs1Q8JZK9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
Hmgcs1Q8JZK9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmgcs1Q8JZK9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmgcs1Q8JZK9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hmgcs1Q8JZK9 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.36■□□□□ 0.85
Hmgcs1Q8JZK9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hmgcs1Q8JZK9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmgcs1Q8JZK9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmgcs1Q8JZK9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hmgcs1Q8JZK9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Hmgcs1Q8JZK9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Hmgcs1Q8JZK9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hmgcs1Q8JZK9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hmgcs1Q8JZK9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Hmgcs1Q8JZK9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Hmgcs1Q8JZK9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hmgcs1Q8JZK9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hmgcs1Q8JZK9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hmgcs1Q8JZK9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Hmgcs1Q8JZK9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
Hmgcs1Q8JZK9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hmgcs1Q8JZK9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Hmgcs1Q8JZK9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.34■□□□□ 0.85
Hmgcs1Q8JZK9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hmgcs1Q8JZK9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hmgcs1Q8JZK9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Hmgcs1Q8JZK9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Hmgcs1Q8JZK9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.33■□□□□ 0.85
Hmgcs1Q8JZK9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hmgcs1Q8JZK9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Hmgcs1Q8JZK9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Hmgcs1Q8JZK9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hmgcs1Q8JZK9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Hmgcs1Q8JZK9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hmgcs1Q8JZK9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hmgcs1Q8JZK9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hmgcs1Q8JZK9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hmgcs1Q8JZK9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.32■□□□□ 0.84
Hmgcs1Q8JZK9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hmgcs1Q8JZK9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hmgcs1Q8JZK9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Hmgcs1Q8JZK9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.32■□□□□ 0.84
Hmgcs1Q8JZK9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.32■□□□□ 0.84
Hmgcs1Q8JZK9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hmgcs1Q8JZK9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.32■□□□□ 0.84
Hmgcs1Q8JZK9 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.32■□□□□ 0.84
Hmgcs1Q8JZK9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hmgcs1Q8JZK9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hmgcs1Q8JZK9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Hmgcs1Q8JZK9 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.31■□□□□ 0.84
Hmgcs1Q8JZK9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hmgcs1Q8JZK9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms