Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CroccQ8CJ40 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CroccQ8CJ40 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CroccQ8CJ40 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CroccQ8CJ40 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CroccQ8CJ40 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.62■□□□□ 0.89
CroccQ8CJ40 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CroccQ8CJ40 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CroccQ8CJ40 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CroccQ8CJ40 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CroccQ8CJ40 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.62■□□□□ 0.89
CroccQ8CJ40 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CroccQ8CJ40 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CroccQ8CJ40 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CroccQ8CJ40 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.61■□□□□ 0.89
CroccQ8CJ40 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CroccQ8CJ40 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CroccQ8CJ40 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CroccQ8CJ40 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CroccQ8CJ40 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CroccQ8CJ40 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CroccQ8CJ40 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CroccQ8CJ40 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.6■□□□□ 0.89
CroccQ8CJ40 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CroccQ8CJ40 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CroccQ8CJ40 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CroccQ8CJ40 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CroccQ8CJ40 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
CroccQ8CJ40 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CroccQ8CJ40 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.59■□□□□ 0.89
CroccQ8CJ40 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.59■□□□□ 0.89
CroccQ8CJ40 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CroccQ8CJ40 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CroccQ8CJ40 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CroccQ8CJ40 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CroccQ8CJ40 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CroccQ8CJ40 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.58■□□□□ 0.89
CroccQ8CJ40 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.58■□□□□ 0.89
CroccQ8CJ40 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CroccQ8CJ40 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CroccQ8CJ40 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CroccQ8CJ40 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CroccQ8CJ40 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CroccQ8CJ40 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CroccQ8CJ40 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CroccQ8CJ40 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CroccQ8CJ40 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.58■□□□□ 0.88
CroccQ8CJ40 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CroccQ8CJ40 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.57■□□□□ 0.88
CroccQ8CJ40 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CroccQ8CJ40 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CroccQ8CJ40 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CroccQ8CJ40 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CroccQ8CJ40 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CroccQ8CJ40 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CroccQ8CJ40 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CroccQ8CJ40 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
CroccQ8CJ40 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CroccQ8CJ40 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CroccQ8CJ40 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CroccQ8CJ40 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CroccQ8CJ40 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.56■□□□□ 0.88
CroccQ8CJ40 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CroccQ8CJ40 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CroccQ8CJ40 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.56■□□□□ 0.88
CroccQ8CJ40 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CroccQ8CJ40 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CroccQ8CJ40 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CroccQ8CJ40 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CroccQ8CJ40 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CroccQ8CJ40 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CroccQ8CJ40 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CroccQ8CJ40 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.54■□□□□ 0.88
CroccQ8CJ40 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CroccQ8CJ40 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.54■□□□□ 0.88
CroccQ8CJ40 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.54■□□□□ 0.88
CroccQ8CJ40 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CroccQ8CJ40 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CroccQ8CJ40 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CroccQ8CJ40 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CroccQ8CJ40 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.54■□□□□ 0.88
CroccQ8CJ40 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.54■□□□□ 0.88
CroccQ8CJ40 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.54■□□□□ 0.88
CroccQ8CJ40 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
CroccQ8CJ40 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CroccQ8CJ40 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CroccQ8CJ40 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CroccQ8CJ40 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CroccQ8CJ40 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CroccQ8CJ40 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CroccQ8CJ40 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CroccQ8CJ40 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CroccQ8CJ40 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CroccQ8CJ40 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CroccQ8CJ40 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CroccQ8CJ40 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CroccQ8CJ40 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CroccQ8CJ40 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CroccQ8CJ40 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CroccQ8CJ40 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms