Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.51■■□□□ 1.03
Zc3h3Q8CHP0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
Zc3h3Q8CHP0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Zc3h3Q8CHP0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.51■■□□□ 1.03
Zc3h3Q8CHP0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Zc3h3Q8CHP0 AC112142.1-201ENSMUST00000228796 918 ntBASIC21.5■■□□□ 1.03
Zc3h3Q8CHP0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Zc3h3Q8CHP0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Zc3h3Q8CHP0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Zc3h3Q8CHP0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Zc3h3Q8CHP0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Zc3h3Q8CHP0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.49■■□□□ 1.03
Zc3h3Q8CHP0 Gm5874-201ENSMUST00000096101 508 ntBASIC21.49■■□□□ 1.03
Zc3h3Q8CHP0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Zc3h3Q8CHP0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Zc3h3Q8CHP0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Zc3h3Q8CHP0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Zc3h3Q8CHP0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Zc3h3Q8CHP0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Zc3h3Q8CHP0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Zc3h3Q8CHP0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.47■■□□□ 1.03
Zc3h3Q8CHP0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.47■■□□□ 1.03
Zc3h3Q8CHP0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Zc3h3Q8CHP0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.46■■□□□ 1.03
Zc3h3Q8CHP0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Zc3h3Q8CHP0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Zc3h3Q8CHP0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Zc3h3Q8CHP0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Zc3h3Q8CHP0 Gm43017-201ENSMUST00000198296 752 ntBASIC21.45■■□□□ 1.02
Zc3h3Q8CHP0 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Zc3h3Q8CHP0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Zc3h3Q8CHP0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Zc3h3Q8CHP0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Zc3h3Q8CHP0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.43■■□□□ 1.02
Zc3h3Q8CHP0 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.43■■□□□ 1.02
Zc3h3Q8CHP0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Zc3h3Q8CHP0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Zc3h3Q8CHP0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.42■■□□□ 1.02
Zc3h3Q8CHP0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Zc3h3Q8CHP0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Zc3h3Q8CHP0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Zc3h3Q8CHP0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Zc3h3Q8CHP0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Zc3h3Q8CHP0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.41■■□□□ 1.02
Zc3h3Q8CHP0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Zc3h3Q8CHP0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Zc3h3Q8CHP0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.41■■□□□ 1.02
Zc3h3Q8CHP0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Zc3h3Q8CHP0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Zc3h3Q8CHP0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Zc3h3Q8CHP0 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.4■■□□□ 1.02
Zc3h3Q8CHP0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.4■■□□□ 1.02
Zc3h3Q8CHP0 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Zc3h3Q8CHP0 Mir7075-201ENSMUST00000184187 82 ntBASIC21.4■■□□□ 1.02
Zc3h3Q8CHP0 Gm43137-201ENSMUST00000198052 594 ntBASIC21.4■■□□□ 1.02
Zc3h3Q8CHP0 Gm7291-201ENSMUST00000199147 382 ntBASIC21.4■■□□□ 1.02
Zc3h3Q8CHP0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Zc3h3Q8CHP0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Zc3h3Q8CHP0 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.4■■□□□ 1.02
Zc3h3Q8CHP0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Zc3h3Q8CHP0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Zc3h3Q8CHP0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Zc3h3Q8CHP0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Zc3h3Q8CHP0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Zc3h3Q8CHP0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Zc3h3Q8CHP0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Zc3h3Q8CHP0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.39■■□□□ 1.01
Zc3h3Q8CHP0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Zc3h3Q8CHP0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Zc3h3Q8CHP0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.38■■□□□ 1.01
Zc3h3Q8CHP0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Zc3h3Q8CHP0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Zc3h3Q8CHP0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Zc3h3Q8CHP0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Zc3h3Q8CHP0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Zc3h3Q8CHP0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Zc3h3Q8CHP0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Zc3h3Q8CHP0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Zc3h3Q8CHP0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Zc3h3Q8CHP0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Zc3h3Q8CHP0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Zc3h3Q8CHP0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Zc3h3Q8CHP0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Zc3h3Q8CHP0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Zc3h3Q8CHP0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Zc3h3Q8CHP0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
Zc3h3Q8CHP0 Amer2-203ENSMUST00000225247 2662 ntBASIC21.36■■□□□ 1.01
Zc3h3Q8CHP0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Zc3h3Q8CHP0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Zc3h3Q8CHP0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Zc3h3Q8CHP0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Zc3h3Q8CHP0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Zc3h3Q8CHP0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Zc3h3Q8CHP0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Zc3h3Q8CHP0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Zc3h3Q8CHP0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Zc3h3Q8CHP0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Zc3h3Q8CHP0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Zc3h3Q8CHP0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Zc3h3Q8CHP0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms