Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Smc4Q8CG47 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC26.57■■□□□ 1.84
Smc4Q8CG47 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Smc4Q8CG47 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Smc4Q8CG47 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Smc4Q8CG47 Gm5131-201ENSMUST00000212776 1238 ntBASIC26.56■■□□□ 1.84
Smc4Q8CG47 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Smc4Q8CG47 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Smc4Q8CG47 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Smc4Q8CG47 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Smc4Q8CG47 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Smc4Q8CG47 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Smc4Q8CG47 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Smc4Q8CG47 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC26.54■■□□□ 1.84
Smc4Q8CG47 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Smc4Q8CG47 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Smc4Q8CG47 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Smc4Q8CG47 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC26.53■■□□□ 1.84
Smc4Q8CG47 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Smc4Q8CG47 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC26.53■■□□□ 1.84
Smc4Q8CG47 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
Smc4Q8CG47 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
Smc4Q8CG47 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
Smc4Q8CG47 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC26.52■■□□□ 1.84
Smc4Q8CG47 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC26.52■■□□□ 1.84
Smc4Q8CG47 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Smc4Q8CG47 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Smc4Q8CG47 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
Smc4Q8CG47 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.84
Smc4Q8CG47 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Smc4Q8CG47 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Smc4Q8CG47 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Smc4Q8CG47 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC26.51■■□□□ 1.83
Smc4Q8CG47 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC26.51■■□□□ 1.83
Smc4Q8CG47 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Smc4Q8CG47 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
Smc4Q8CG47 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Smc4Q8CG47 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Smc4Q8CG47 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
Smc4Q8CG47 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC26.5■■□□□ 1.83
Smc4Q8CG47 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Smc4Q8CG47 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Smc4Q8CG47 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC26.5■■□□□ 1.83
Smc4Q8CG47 Gm8093-201ENSMUST00000128935 1892 ntBASIC26.49■■□□□ 1.83
Smc4Q8CG47 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Smc4Q8CG47 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC26.49■■□□□ 1.83
Smc4Q8CG47 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
Smc4Q8CG47 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
Smc4Q8CG47 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Smc4Q8CG47 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Smc4Q8CG47 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Smc4Q8CG47 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
Smc4Q8CG47 Gm7417-201ENSMUST00000192950 473 ntBASIC26.48■■□□□ 1.83
Smc4Q8CG47 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Smc4Q8CG47 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Smc4Q8CG47 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Smc4Q8CG47 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Smc4Q8CG47 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Smc4Q8CG47 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC26.47■■□□□ 1.83
Smc4Q8CG47 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Smc4Q8CG47 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Smc4Q8CG47 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Smc4Q8CG47 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC26.47■■□□□ 1.83
Smc4Q8CG47 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
Smc4Q8CG47 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Smc4Q8CG47 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC26.46■■□□□ 1.83
Smc4Q8CG47 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC26.46■■□□□ 1.83
Smc4Q8CG47 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Smc4Q8CG47 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Smc4Q8CG47 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Smc4Q8CG47 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Smc4Q8CG47 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Smc4Q8CG47 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Smc4Q8CG47 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Smc4Q8CG47 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Smc4Q8CG47 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC26.45■■□□□ 1.82
Smc4Q8CG47 Gm10399-202ENSMUST00000202768 748 ntBASIC26.45■■□□□ 1.82
Smc4Q8CG47 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Smc4Q8CG47 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Smc4Q8CG47 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Smc4Q8CG47 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC26.44■■□□□ 1.82
Smc4Q8CG47 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Smc4Q8CG47 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Smc4Q8CG47 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Smc4Q8CG47 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC26.43■■□□□ 1.82
Smc4Q8CG47 Gm40881-201ENSMUST00000223397 166 ntBASIC26.43■■□□□ 1.82
Smc4Q8CG47 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Smc4Q8CG47 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC26.42■■□□□ 1.82
Smc4Q8CG47 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC26.42■■□□□ 1.82
Smc4Q8CG47 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Smc4Q8CG47 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Smc4Q8CG47 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC26.42■■□□□ 1.82
Smc4Q8CG47 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC26.41■■□□□ 1.82
Smc4Q8CG47 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Smc4Q8CG47 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Smc4Q8CG47 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Smc4Q8CG47 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Smc4Q8CG47 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Smc4Q8CG47 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Smc4Q8CG47 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms