Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Smc5Q8CG46 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Smc5Q8CG46 AC151971.4-201ENSMUST00000214717 704 ntBASIC26.73■■□□□ 1.87
Smc5Q8CG46 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Smc5Q8CG46 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Smc5Q8CG46 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Smc5Q8CG46 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Smc5Q8CG46 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Smc5Q8CG46 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC26.72■■□□□ 1.87
Smc5Q8CG46 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Smc5Q8CG46 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Smc5Q8CG46 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC26.72■■□□□ 1.87
Smc5Q8CG46 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Smc5Q8CG46 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Smc5Q8CG46 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Smc5Q8CG46 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
Smc5Q8CG46 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Smc5Q8CG46 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC26.7■■□□□ 1.86
Smc5Q8CG46 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC26.69■■□□□ 1.86
Smc5Q8CG46 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Smc5Q8CG46 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Smc5Q8CG46 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC26.69■■□□□ 1.86
Smc5Q8CG46 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC26.69■■□□□ 1.86
Smc5Q8CG46 Gm6311-201ENSMUST00000073790 878 ntBASIC26.69■■□□□ 1.86
Smc5Q8CG46 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Smc5Q8CG46 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Smc5Q8CG46 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Smc5Q8CG46 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Smc5Q8CG46 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC26.68■■□□□ 1.86
Smc5Q8CG46 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Smc5Q8CG46 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
Smc5Q8CG46 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Smc5Q8CG46 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Smc5Q8CG46 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Smc5Q8CG46 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Smc5Q8CG46 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Smc5Q8CG46 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Smc5Q8CG46 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Smc5Q8CG46 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
Smc5Q8CG46 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Smc5Q8CG46 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Smc5Q8CG46 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Smc5Q8CG46 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC26.65■■□□□ 1.86
Smc5Q8CG46 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Smc5Q8CG46 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Smc5Q8CG46 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Smc5Q8CG46 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Smc5Q8CG46 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Smc5Q8CG46 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Smc5Q8CG46 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Smc5Q8CG46 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Smc5Q8CG46 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC26.63■■□□□ 1.85
Smc5Q8CG46 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
Smc5Q8CG46 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
Smc5Q8CG46 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Smc5Q8CG46 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Smc5Q8CG46 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Smc5Q8CG46 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Smc5Q8CG46 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Smc5Q8CG46 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC26.62■■□□□ 1.85
Smc5Q8CG46 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Smc5Q8CG46 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Smc5Q8CG46 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Smc5Q8CG46 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC26.61■■□□□ 1.85
Smc5Q8CG46 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Smc5Q8CG46 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
Smc5Q8CG46 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Smc5Q8CG46 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Smc5Q8CG46 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC26.59■■□□□ 1.85
Smc5Q8CG46 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Smc5Q8CG46 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Smc5Q8CG46 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Smc5Q8CG46 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.59■■□□□ 1.85
Smc5Q8CG46 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Smc5Q8CG46 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC26.59■■□□□ 1.85
Smc5Q8CG46 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Smc5Q8CG46 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Smc5Q8CG46 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
Smc5Q8CG46 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC26.57■■□□□ 1.84
Smc5Q8CG46 Scarna2-201ENSMUST00000157560 414 ntBASIC26.57■■□□□ 1.84
Smc5Q8CG46 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Smc5Q8CG46 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Smc5Q8CG46 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Smc5Q8CG46 Gm43403-201ENSMUST00000198011 1786 ntBASIC26.56■■□□□ 1.84
Smc5Q8CG46 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Smc5Q8CG46 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Smc5Q8CG46 Hsf1-207ENSMUST00000228371 2102 ntBASIC26.56■■□□□ 1.84
Smc5Q8CG46 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Smc5Q8CG46 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Smc5Q8CG46 Gm16437-201ENSMUST00000025669 507 ntBASIC26.55■■□□□ 1.84
Smc5Q8CG46 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Smc5Q8CG46 Gm9806-201ENSMUST00000051080 552 ntBASIC26.55■■□□□ 1.84
Smc5Q8CG46 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Smc5Q8CG46 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC26.55■■□□□ 1.84
Smc5Q8CG46 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Smc5Q8CG46 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Smc5Q8CG46 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Smc5Q8CG46 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Smc5Q8CG46 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Smc5Q8CG46 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 167 ms