Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trim9Q8C7M3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trim9Q8C7M3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.82■■□□□ 1.4
Trim9Q8C7M3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Trim9Q8C7M3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trim9Q8C7M3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trim9Q8C7M3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trim9Q8C7M3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim9Q8C7M3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim9Q8C7M3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC23.81■■□□□ 1.4
Trim9Q8C7M3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC23.81■■□□□ 1.4
Trim9Q8C7M3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.81■■□□□ 1.4
Trim9Q8C7M3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC23.81■■□□□ 1.4
Trim9Q8C7M3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Trim9Q8C7M3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim9Q8C7M3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim9Q8C7M3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim9Q8C7M3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim9Q8C7M3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim9Q8C7M3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim9Q8C7M3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim9Q8C7M3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Trim9Q8C7M3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim9Q8C7M3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC23.78■■□□□ 1.4
Trim9Q8C7M3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.78■■□□□ 1.4
Trim9Q8C7M3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
Trim9Q8C7M3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Trim9Q8C7M3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim9Q8C7M3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Trim9Q8C7M3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim9Q8C7M3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Trim9Q8C7M3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Trim9Q8C7M3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim9Q8C7M3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Trim9Q8C7M3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
Trim9Q8C7M3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Trim9Q8C7M3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
Trim9Q8C7M3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim9Q8C7M3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim9Q8C7M3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim9Q8C7M3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim9Q8C7M3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Trim9Q8C7M3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Trim9Q8C7M3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Trim9Q8C7M3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Trim9Q8C7M3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Trim9Q8C7M3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Trim9Q8C7M3 Gm5067-201ENSMUST00000170449 1009 ntBASIC23.75■■□□□ 1.39
Trim9Q8C7M3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim9Q8C7M3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim9Q8C7M3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim9Q8C7M3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim9Q8C7M3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Trim9Q8C7M3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim9Q8C7M3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim9Q8C7M3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Trim9Q8C7M3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Trim9Q8C7M3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim9Q8C7M3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim9Q8C7M3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC23.73■■□□□ 1.39
Trim9Q8C7M3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim9Q8C7M3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim9Q8C7M3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC23.73■■□□□ 1.39
Trim9Q8C7M3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim9Q8C7M3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Trim9Q8C7M3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim9Q8C7M3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Trim9Q8C7M3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.72■■□□□ 1.39
Trim9Q8C7M3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Trim9Q8C7M3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Trim9Q8C7M3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC23.72■■□□□ 1.39
Trim9Q8C7M3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC23.71■■□□□ 1.39
Trim9Q8C7M3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim9Q8C7M3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC23.71■■□□□ 1.39
Trim9Q8C7M3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC23.71■■□□□ 1.39
Trim9Q8C7M3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim9Q8C7M3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim9Q8C7M3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim9Q8C7M3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim9Q8C7M3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC23.7■■□□□ 1.39
Trim9Q8C7M3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Trim9Q8C7M3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
Trim9Q8C7M3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Trim9Q8C7M3 Gm37415-201ENSMUST00000192265 2054 ntBASIC23.7■■□□□ 1.38
Trim9Q8C7M3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Trim9Q8C7M3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim9Q8C7M3 Gm42418-201ENSMUST00000182010 1831 ntBASIC23.69■■□□□ 1.38
Trim9Q8C7M3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Trim9Q8C7M3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC23.69■■□□□ 1.38
Trim9Q8C7M3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Trim9Q8C7M3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim9Q8C7M3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim9Q8C7M3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim9Q8C7M3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim9Q8C7M3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim9Q8C7M3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim9Q8C7M3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Trim9Q8C7M3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim9Q8C7M3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Trim9Q8C7M3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms