Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Trub1Q8C0D0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trub1Q8C0D0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trub1Q8C0D0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Trub1Q8C0D0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.22■■□□□ 1.15
Trub1Q8C0D0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trub1Q8C0D0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Trub1Q8C0D0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trub1Q8C0D0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Trub1Q8C0D0 Cap2-205ENSMUST00000225824 1634 ntBASIC22.21■■□□□ 1.15
Trub1Q8C0D0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trub1Q8C0D0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.21■■□□□ 1.15
Trub1Q8C0D0 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.21■■□□□ 1.15
Trub1Q8C0D0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Trub1Q8C0D0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC22.21■■□□□ 1.15
Trub1Q8C0D0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trub1Q8C0D0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trub1Q8C0D0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC22.21■■□□□ 1.15
Trub1Q8C0D0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.21■■□□□ 1.15
Trub1Q8C0D0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trub1Q8C0D0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trub1Q8C0D0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Trub1Q8C0D0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.2■■□□□ 1.14
Trub1Q8C0D0 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.2■■□□□ 1.14
Trub1Q8C0D0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.2■■□□□ 1.14
Trub1Q8C0D0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trub1Q8C0D0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Trub1Q8C0D0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Trub1Q8C0D0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trub1Q8C0D0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Trub1Q8C0D0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trub1Q8C0D0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trub1Q8C0D0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trub1Q8C0D0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.18■■□□□ 1.14
Trub1Q8C0D0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trub1Q8C0D0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trub1Q8C0D0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trub1Q8C0D0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trub1Q8C0D0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trub1Q8C0D0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Trub1Q8C0D0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
Trub1Q8C0D0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC22.16■■□□□ 1.14
Trub1Q8C0D0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trub1Q8C0D0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trub1Q8C0D0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trub1Q8C0D0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trub1Q8C0D0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trub1Q8C0D0 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Trub1Q8C0D0 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trub1Q8C0D0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trub1Q8C0D0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
Trub1Q8C0D0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Trub1Q8C0D0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Trub1Q8C0D0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trub1Q8C0D0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trub1Q8C0D0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.15■■□□□ 1.14
Trub1Q8C0D0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trub1Q8C0D0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trub1Q8C0D0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Trub1Q8C0D0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
Trub1Q8C0D0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trub1Q8C0D0 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.14■■□□□ 1.13
Trub1Q8C0D0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Trub1Q8C0D0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.13
Trub1Q8C0D0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trub1Q8C0D0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Trub1Q8C0D0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Trub1Q8C0D0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trub1Q8C0D0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trub1Q8C0D0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Trub1Q8C0D0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trub1Q8C0D0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.12■■□□□ 1.13
Trub1Q8C0D0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trub1Q8C0D0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.12■■□□□ 1.13
Trub1Q8C0D0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trub1Q8C0D0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trub1Q8C0D0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trub1Q8C0D0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Trub1Q8C0D0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trub1Q8C0D0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.11■■□□□ 1.13
Trub1Q8C0D0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trub1Q8C0D0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Trub1Q8C0D0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC22.11■■□□□ 1.13
Trub1Q8C0D0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC22.11■■□□□ 1.13
Trub1Q8C0D0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC22.11■■□□□ 1.13
Trub1Q8C0D0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Trub1Q8C0D0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Trub1Q8C0D0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trub1Q8C0D0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trub1Q8C0D0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trub1Q8C0D0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trub1Q8C0D0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.09■■□□□ 1.13
Trub1Q8C0D0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.09■■□□□ 1.13
Trub1Q8C0D0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Trub1Q8C0D0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trub1Q8C0D0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Trub1Q8C0D0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Trub1Q8C0D0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Trub1Q8C0D0 Gm37415-201ENSMUST00000192265 2054 ntBASIC22.09■■□□□ 1.13
Trub1Q8C0D0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms