Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Slc5a7Q8BGY9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc5a7Q8BGY9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Slc5a7Q8BGY9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Slc5a7Q8BGY9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.78■□□□□ 0.6
Slc5a7Q8BGY9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.78■□□□□ 0.6
Slc5a7Q8BGY9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc5a7Q8BGY9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Slc5a7Q8BGY9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc5a7Q8BGY9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Slc5a7Q8BGY9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc5a7Q8BGY9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc5a7Q8BGY9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc5a7Q8BGY9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Slc5a7Q8BGY9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Slc5a7Q8BGY9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Slc5a7Q8BGY9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc5a7Q8BGY9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc5a7Q8BGY9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc5a7Q8BGY9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc5a7Q8BGY9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc5a7Q8BGY9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc5a7Q8BGY9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc5a7Q8BGY9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc5a7Q8BGY9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Slc5a7Q8BGY9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Slc5a7Q8BGY9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.75■□□□□ 0.59
Slc5a7Q8BGY9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc5a7Q8BGY9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc5a7Q8BGY9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc5a7Q8BGY9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Slc5a7Q8BGY9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc5a7Q8BGY9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc5a7Q8BGY9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Slc5a7Q8BGY9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.73■□□□□ 0.59
Slc5a7Q8BGY9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Slc5a7Q8BGY9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Slc5a7Q8BGY9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc5a7Q8BGY9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Slc5a7Q8BGY9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc5a7Q8BGY9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Slc5a7Q8BGY9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc5a7Q8BGY9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.72■□□□□ 0.59
Slc5a7Q8BGY9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc5a7Q8BGY9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc5a7Q8BGY9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc5a7Q8BGY9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc5a7Q8BGY9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc5a7Q8BGY9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc5a7Q8BGY9 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc5a7Q8BGY9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Slc5a7Q8BGY9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc5a7Q8BGY9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slc5a7Q8BGY9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc5a7Q8BGY9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Slc5a7Q8BGY9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Slc5a7Q8BGY9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc5a7Q8BGY9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc5a7Q8BGY9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.7■□□□□ 0.58
Slc5a7Q8BGY9 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.7■□□□□ 0.58
Slc5a7Q8BGY9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc5a7Q8BGY9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc5a7Q8BGY9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Slc5a7Q8BGY9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Slc5a7Q8BGY9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc5a7Q8BGY9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc5a7Q8BGY9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Slc5a7Q8BGY9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc5a7Q8BGY9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc5a7Q8BGY9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc5a7Q8BGY9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc5a7Q8BGY9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.69■□□□□ 0.58
Slc5a7Q8BGY9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc5a7Q8BGY9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Slc5a7Q8BGY9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.69■□□□□ 0.58
Slc5a7Q8BGY9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Slc5a7Q8BGY9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Slc5a7Q8BGY9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc5a7Q8BGY9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc5a7Q8BGY9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc5a7Q8BGY9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc5a7Q8BGY9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.68■□□□□ 0.58
Slc5a7Q8BGY9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.68■□□□□ 0.58
Slc5a7Q8BGY9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc5a7Q8BGY9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.68■□□□□ 0.58
Slc5a7Q8BGY9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Slc5a7Q8BGY9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc5a7Q8BGY9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc5a7Q8BGY9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc5a7Q8BGY9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc5a7Q8BGY9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.67■□□□□ 0.58
Slc5a7Q8BGY9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Slc5a7Q8BGY9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc5a7Q8BGY9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc5a7Q8BGY9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Slc5a7Q8BGY9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc5a7Q8BGY9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc5a7Q8BGY9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.66■□□□□ 0.58
Slc5a7Q8BGY9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc5a7Q8BGY9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms