Protein–RNA interactions for Protein: Q80Z24

Negr1, Neuronal growth regulator 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Negr1Q80Z24 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.89■□□□□ 0.61
Negr1Q80Z24 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Negr1Q80Z24 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Negr1Q80Z24 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Negr1Q80Z24 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Negr1Q80Z24 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Negr1Q80Z24 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Negr1Q80Z24 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Negr1Q80Z24 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Negr1Q80Z24 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Negr1Q80Z24 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Negr1Q80Z24 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.87■□□□□ 0.61
Negr1Q80Z24 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Negr1Q80Z24 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Negr1Q80Z24 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Negr1Q80Z24 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Negr1Q80Z24 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Negr1Q80Z24 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Negr1Q80Z24 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.86■□□□□ 0.61
Negr1Q80Z24 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Negr1Q80Z24 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Negr1Q80Z24 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.86■□□□□ 0.61
Negr1Q80Z24 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Negr1Q80Z24 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Negr1Q80Z24 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Negr1Q80Z24 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Negr1Q80Z24 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Negr1Q80Z24 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.85■□□□□ 0.61
Negr1Q80Z24 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Negr1Q80Z24 Cap2-205ENSMUST00000225824 1634 ntBASIC18.85■□□□□ 0.61
Negr1Q80Z24 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Negr1Q80Z24 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Negr1Q80Z24 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.84■□□□□ 0.61
Negr1Q80Z24 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
Negr1Q80Z24 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Negr1Q80Z24 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Negr1Q80Z24 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Negr1Q80Z24 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Negr1Q80Z24 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Negr1Q80Z24 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Negr1Q80Z24 Gm10420-201ENSMUST00000121713 882 ntBASIC18.83■□□□□ 0.6
Negr1Q80Z24 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Negr1Q80Z24 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Negr1Q80Z24 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Negr1Q80Z24 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Negr1Q80Z24 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.82■□□□□ 0.6
Negr1Q80Z24 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Negr1Q80Z24 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Negr1Q80Z24 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Negr1Q80Z24 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.82■□□□□ 0.6
Negr1Q80Z24 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.81■□□□□ 0.6
Negr1Q80Z24 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Negr1Q80Z24 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.81■□□□□ 0.6
Negr1Q80Z24 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.81■□□□□ 0.6
Negr1Q80Z24 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.81■□□□□ 0.6
Negr1Q80Z24 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Negr1Q80Z24 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Negr1Q80Z24 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Negr1Q80Z24 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Negr1Q80Z24 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Negr1Q80Z24 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Negr1Q80Z24 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.8■□□□□ 0.6
Negr1Q80Z24 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Negr1Q80Z24 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Negr1Q80Z24 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.8■□□□□ 0.6
Negr1Q80Z24 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Negr1Q80Z24 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Negr1Q80Z24 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Negr1Q80Z24 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Negr1Q80Z24 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Negr1Q80Z24 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Negr1Q80Z24 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Negr1Q80Z24 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Negr1Q80Z24 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Negr1Q80Z24 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Negr1Q80Z24 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.79■□□□□ 0.6
Negr1Q80Z24 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.79■□□□□ 0.6
Negr1Q80Z24 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Negr1Q80Z24 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Negr1Q80Z24 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Negr1Q80Z24 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Negr1Q80Z24 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Negr1Q80Z24 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Negr1Q80Z24 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.78■□□□□ 0.6
Negr1Q80Z24 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Negr1Q80Z24 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Negr1Q80Z24 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.78■□□□□ 0.6
Negr1Q80Z24 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Negr1Q80Z24 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Negr1Q80Z24 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Negr1Q80Z24 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.77■□□□□ 0.6
Negr1Q80Z24 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Negr1Q80Z24 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Negr1Q80Z24 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Negr1Q80Z24 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Negr1Q80Z24 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Negr1Q80Z24 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Negr1Q80Z24 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Negr1Q80Z24 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.75■□□□□ 0.59
Negr1Q80Z24 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 126.7 ms