Protein–RNA interactions for Protein: Q80VG1

Scml4, Sex comb on midleg-like protein 4, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scml4Q80VG1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Scml4Q80VG1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.34■□□□□ 0.53
Scml4Q80VG1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scml4Q80VG1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scml4Q80VG1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scml4Q80VG1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scml4Q80VG1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scml4Q80VG1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scml4Q80VG1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scml4Q80VG1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Scml4Q80VG1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scml4Q80VG1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scml4Q80VG1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scml4Q80VG1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Scml4Q80VG1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scml4Q80VG1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scml4Q80VG1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
Scml4Q80VG1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scml4Q80VG1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Scml4Q80VG1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.32■□□□□ 0.52
Scml4Q80VG1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Scml4Q80VG1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scml4Q80VG1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.31■□□□□ 0.52
Scml4Q80VG1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scml4Q80VG1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scml4Q80VG1 Gm22567-201ENSMUST00000175542 342 ntBASIC18.31■□□□□ 0.52
Scml4Q80VG1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scml4Q80VG1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scml4Q80VG1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scml4Q80VG1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scml4Q80VG1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Scml4Q80VG1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scml4Q80VG1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.29■□□□□ 0.52
Scml4Q80VG1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scml4Q80VG1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scml4Q80VG1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scml4Q80VG1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scml4Q80VG1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Scml4Q80VG1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scml4Q80VG1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scml4Q80VG1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Scml4Q80VG1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scml4Q80VG1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.28■□□□□ 0.52
Scml4Q80VG1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scml4Q80VG1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Scml4Q80VG1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Scml4Q80VG1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scml4Q80VG1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Scml4Q80VG1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Scml4Q80VG1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Scml4Q80VG1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scml4Q80VG1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scml4Q80VG1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Scml4Q80VG1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scml4Q80VG1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scml4Q80VG1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scml4Q80VG1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scml4Q80VG1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.25■□□□□ 0.51
Scml4Q80VG1 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.25■□□□□ 0.51
Scml4Q80VG1 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.25■□□□□ 0.51
Scml4Q80VG1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scml4Q80VG1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scml4Q80VG1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Scml4Q80VG1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scml4Q80VG1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scml4Q80VG1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scml4Q80VG1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Scml4Q80VG1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Scml4Q80VG1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Scml4Q80VG1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.24■□□□□ 0.51
Scml4Q80VG1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Scml4Q80VG1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scml4Q80VG1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scml4Q80VG1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Scml4Q80VG1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scml4Q80VG1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Scml4Q80VG1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scml4Q80VG1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scml4Q80VG1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scml4Q80VG1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scml4Q80VG1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scml4Q80VG1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scml4Q80VG1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Scml4Q80VG1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scml4Q80VG1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Scml4Q80VG1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scml4Q80VG1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scml4Q80VG1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Scml4Q80VG1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scml4Q80VG1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.2■□□□□ 0.5
Scml4Q80VG1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Scml4Q80VG1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scml4Q80VG1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Scml4Q80VG1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scml4Q80VG1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scml4Q80VG1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scml4Q80VG1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scml4Q80VG1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scml4Q80VG1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scml4Q80VG1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms