Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Rfx4Q7TNK1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfx4Q7TNK1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfx4Q7TNK1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfx4Q7TNK1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfx4Q7TNK1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rfx4Q7TNK1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Rfx4Q7TNK1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfx4Q7TNK1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rfx4Q7TNK1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.54■□□□□ 0.88
Rfx4Q7TNK1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rfx4Q7TNK1 Gm4799-201ENSMUST00000095396 657 ntBASIC20.54■□□□□ 0.88
Rfx4Q7TNK1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Rfx4Q7TNK1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfx4Q7TNK1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfx4Q7TNK1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfx4Q7TNK1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx4Q7TNK1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx4Q7TNK1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.53■□□□□ 0.88
Rfx4Q7TNK1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx4Q7TNK1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.53■□□□□ 0.88
Rfx4Q7TNK1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx4Q7TNK1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx4Q7TNK1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rfx4Q7TNK1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfx4Q7TNK1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfx4Q7TNK1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfx4Q7TNK1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rfx4Q7TNK1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Rfx4Q7TNK1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Rfx4Q7TNK1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rfx4Q7TNK1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfx4Q7TNK1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfx4Q7TNK1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rfx4Q7TNK1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfx4Q7TNK1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfx4Q7TNK1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Rfx4Q7TNK1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfx4Q7TNK1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Rfx4Q7TNK1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.5■□□□□ 0.87
Rfx4Q7TNK1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Rfx4Q7TNK1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfx4Q7TNK1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rfx4Q7TNK1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.49■□□□□ 0.87
Rfx4Q7TNK1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rfx4Q7TNK1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.49■□□□□ 0.87
Rfx4Q7TNK1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rfx4Q7TNK1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rfx4Q7TNK1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfx4Q7TNK1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfx4Q7TNK1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfx4Q7TNK1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.48■□□□□ 0.87
Rfx4Q7TNK1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.48■□□□□ 0.87
Rfx4Q7TNK1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfx4Q7TNK1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rfx4Q7TNK1 Terc-201ENSMUST00000082862 423 ntBASIC20.47■□□□□ 0.87
Rfx4Q7TNK1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rfx4Q7TNK1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rfx4Q7TNK1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Rfx4Q7TNK1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Rfx4Q7TNK1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
Rfx4Q7TNK1 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.46■□□□□ 0.87
Rfx4Q7TNK1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rfx4Q7TNK1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.45■□□□□ 0.86
Rfx4Q7TNK1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfx4Q7TNK1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.45■□□□□ 0.86
Rfx4Q7TNK1 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.45■□□□□ 0.86
Rfx4Q7TNK1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfx4Q7TNK1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfx4Q7TNK1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx4Q7TNK1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx4Q7TNK1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx4Q7TNK1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx4Q7TNK1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx4Q7TNK1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.44■□□□□ 0.86
Rfx4Q7TNK1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx4Q7TNK1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.43■□□□□ 0.86
Rfx4Q7TNK1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rfx4Q7TNK1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfx4Q7TNK1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Rfx4Q7TNK1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfx4Q7TNK1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.43■□□□□ 0.86
Rfx4Q7TNK1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rfx4Q7TNK1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rfx4Q7TNK1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rfx4Q7TNK1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.42■□□□□ 0.86
Rfx4Q7TNK1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rfx4Q7TNK1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rfx4Q7TNK1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfx4Q7TNK1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfx4Q7TNK1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfx4Q7TNK1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfx4Q7TNK1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfx4Q7TNK1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
Rfx4Q7TNK1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Rfx4Q7TNK1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Rfx4Q7TNK1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rfx4Q7TNK1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Rfx4Q7TNK1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rfx4Q7TNK1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms