Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn4bQ7M729 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Scn4bQ7M729 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn4bQ7M729 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Scn4bQ7M729 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn4bQ7M729 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Scn4bQ7M729 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn4bQ7M729 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.9■□□□□ 0.94
Scn4bQ7M729 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
Scn4bQ7M729 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn4bQ7M729 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Scn4bQ7M729 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Scn4bQ7M729 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.9■□□□□ 0.94
Scn4bQ7M729 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.89■□□□□ 0.94
Scn4bQ7M729 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.89■□□□□ 0.94
Scn4bQ7M729 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn4bQ7M729 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Scn4bQ7M729 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn4bQ7M729 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Scn4bQ7M729 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn4bQ7M729 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Scn4bQ7M729 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Scn4bQ7M729 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Scn4bQ7M729 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn4bQ7M729 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Scn4bQ7M729 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.88■□□□□ 0.93
Scn4bQ7M729 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn4bQ7M729 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn4bQ7M729 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
Scn4bQ7M729 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn4bQ7M729 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn4bQ7M729 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.87■□□□□ 0.93
Scn4bQ7M729 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn4bQ7M729 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Scn4bQ7M729 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn4bQ7M729 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn4bQ7M729 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn4bQ7M729 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn4bQ7M729 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Scn4bQ7M729 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Scn4bQ7M729 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.86■□□□□ 0.93
Scn4bQ7M729 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn4bQ7M729 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn4bQ7M729 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.86■□□□□ 0.93
Scn4bQ7M729 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn4bQ7M729 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Scn4bQ7M729 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scn4bQ7M729 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Scn4bQ7M729 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.85■□□□□ 0.93
Scn4bQ7M729 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Scn4bQ7M729 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Scn4bQ7M729 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Scn4bQ7M729 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn4bQ7M729 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn4bQ7M729 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.84■□□□□ 0.93
Scn4bQ7M729 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Scn4bQ7M729 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn4bQ7M729 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Scn4bQ7M729 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn4bQ7M729 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scn4bQ7M729 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Scn4bQ7M729 Gm10420-201ENSMUST00000121713 882 ntBASIC20.83■□□□□ 0.93
Scn4bQ7M729 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Scn4bQ7M729 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.83■□□□□ 0.92
Scn4bQ7M729 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Scn4bQ7M729 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn4bQ7M729 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.82■□□□□ 0.92
Scn4bQ7M729 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.82■□□□□ 0.92
Scn4bQ7M729 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
Scn4bQ7M729 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.81■□□□□ 0.92
Scn4bQ7M729 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn4bQ7M729 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn4bQ7M729 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Scn4bQ7M729 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.81■□□□□ 0.92
Scn4bQ7M729 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn4bQ7M729 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Scn4bQ7M729 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn4bQ7M729 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn4bQ7M729 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Scn4bQ7M729 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Scn4bQ7M729 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Scn4bQ7M729 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn4bQ7M729 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.8■□□□□ 0.92
Scn4bQ7M729 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Scn4bQ7M729 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Scn4bQ7M729 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn4bQ7M729 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn4bQ7M729 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Scn4bQ7M729 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn4bQ7M729 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn4bQ7M729 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.79■□□□□ 0.92
Scn4bQ7M729 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.79■□□□□ 0.92
Scn4bQ7M729 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn4bQ7M729 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.79■□□□□ 0.92
Scn4bQ7M729 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Scn4bQ7M729 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn4bQ7M729 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn4bQ7M729 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.78■□□□□ 0.92
Scn4bQ7M729 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn4bQ7M729 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms