Protein–RNA interactions for Protein: Q6RUU0

Ptx4, Pentraxin-4, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx4Q6RUU0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ptx4Q6RUU0 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ptx4Q6RUU0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ptx4Q6RUU0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ptx4Q6RUU0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ptx4Q6RUU0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ptx4Q6RUU0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Ptx4Q6RUU0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ptx4Q6RUU0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ptx4Q6RUU0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ptx4Q6RUU0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ptx4Q6RUU0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Ptx4Q6RUU0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ptx4Q6RUU0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.73■□□□□ 0.91
Ptx4Q6RUU0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ptx4Q6RUU0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.73■□□□□ 0.91
Ptx4Q6RUU0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.73■□□□□ 0.91
Ptx4Q6RUU0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ptx4Q6RUU0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ptx4Q6RUU0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ptx4Q6RUU0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.72■□□□□ 0.91
Ptx4Q6RUU0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Ptx4Q6RUU0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ptx4Q6RUU0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.72■□□□□ 0.91
Ptx4Q6RUU0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ptx4Q6RUU0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ptx4Q6RUU0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ptx4Q6RUU0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ptx4Q6RUU0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ptx4Q6RUU0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ptx4Q6RUU0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ptx4Q6RUU0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ptx4Q6RUU0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ptx4Q6RUU0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ptx4Q6RUU0 Gm10420-201ENSMUST00000121713 882 ntBASIC20.7■□□□□ 0.9
Ptx4Q6RUU0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.7■□□□□ 0.9
Ptx4Q6RUU0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ptx4Q6RUU0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ptx4Q6RUU0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.69■□□□□ 0.9
Ptx4Q6RUU0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ptx4Q6RUU0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ptx4Q6RUU0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ptx4Q6RUU0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ptx4Q6RUU0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.68■□□□□ 0.9
Ptx4Q6RUU0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.68■□□□□ 0.9
Ptx4Q6RUU0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ptx4Q6RUU0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.68■□□□□ 0.9
Ptx4Q6RUU0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ptx4Q6RUU0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.67■□□□□ 0.9
Ptx4Q6RUU0 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.67■□□□□ 0.9
Ptx4Q6RUU0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ptx4Q6RUU0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ptx4Q6RUU0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ptx4Q6RUU0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ptx4Q6RUU0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ptx4Q6RUU0 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.66■□□□□ 0.9
Ptx4Q6RUU0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptx4Q6RUU0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptx4Q6RUU0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Ptx4Q6RUU0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ptx4Q6RUU0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptx4Q6RUU0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptx4Q6RUU0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.66■□□□□ 0.9
Ptx4Q6RUU0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ptx4Q6RUU0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptx4Q6RUU0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ptx4Q6RUU0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ptx4Q6RUU0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
Ptx4Q6RUU0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.65■□□□□ 0.9
Ptx4Q6RUU0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.65■□□□□ 0.9
Ptx4Q6RUU0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ptx4Q6RUU0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.65■□□□□ 0.9
Ptx4Q6RUU0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ptx4Q6RUU0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ptx4Q6RUU0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ptx4Q6RUU0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ptx4Q6RUU0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptx4Q6RUU0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.64■□□□□ 0.89
Ptx4Q6RUU0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Ptx4Q6RUU0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptx4Q6RUU0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptx4Q6RUU0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptx4Q6RUU0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptx4Q6RUU0 Cap2-205ENSMUST00000225824 1634 ntBASIC20.64■□□□□ 0.89
Ptx4Q6RUU0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptx4Q6RUU0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.63■□□□□ 0.89
Ptx4Q6RUU0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ptx4Q6RUU0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ptx4Q6RUU0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.63■□□□□ 0.89
Ptx4Q6RUU0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptx4Q6RUU0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptx4Q6RUU0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptx4Q6RUU0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptx4Q6RUU0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ptx4Q6RUU0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptx4Q6RUU0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Ptx4Q6RUU0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ptx4Q6RUU0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptx4Q6RUU0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ptx4Q6RUU0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms