Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Rif1Q6PR54 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.51■□□□□ 0.55
Rif1Q6PR54 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Rif1Q6PR54 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rif1Q6PR54 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rif1Q6PR54 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Rif1Q6PR54 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rif1Q6PR54 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rif1Q6PR54 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
Rif1Q6PR54 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rif1Q6PR54 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Rif1Q6PR54 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rif1Q6PR54 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rif1Q6PR54 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rif1Q6PR54 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Rif1Q6PR54 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rif1Q6PR54 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rif1Q6PR54 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rif1Q6PR54 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rif1Q6PR54 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rif1Q6PR54 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rif1Q6PR54 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.47■□□□□ 0.55
Rif1Q6PR54 Gm8493-201ENSMUST00000196881 489 ntBASIC18.47■□□□□ 0.55
Rif1Q6PR54 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rif1Q6PR54 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rif1Q6PR54 Nespas-201ENSMUST00000143738 1083 ntBASIC18.47■□□□□ 0.55
Rif1Q6PR54 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.47■□□□□ 0.55
Rif1Q6PR54 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rif1Q6PR54 Gm43137-201ENSMUST00000198052 594 ntBASIC18.46■□□□□ 0.55
Rif1Q6PR54 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rif1Q6PR54 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rif1Q6PR54 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rif1Q6PR54 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Rif1Q6PR54 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rif1Q6PR54 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rif1Q6PR54 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rif1Q6PR54 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rif1Q6PR54 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rif1Q6PR54 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rif1Q6PR54 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rif1Q6PR54 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rif1Q6PR54 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Rif1Q6PR54 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rif1Q6PR54 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rif1Q6PR54 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.44■□□□□ 0.54
Rif1Q6PR54 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.44■□□□□ 0.54
Rif1Q6PR54 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rif1Q6PR54 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rif1Q6PR54 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.44■□□□□ 0.54
Rif1Q6PR54 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.44■□□□□ 0.54
Rif1Q6PR54 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.44■□□□□ 0.54
Rif1Q6PR54 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rif1Q6PR54 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rif1Q6PR54 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rif1Q6PR54 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rif1Q6PR54 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rif1Q6PR54 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rif1Q6PR54 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.43■□□□□ 0.54
Rif1Q6PR54 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.43■□□□□ 0.54
Rif1Q6PR54 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.42■□□□□ 0.54
Rif1Q6PR54 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rif1Q6PR54 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.42■□□□□ 0.54
Rif1Q6PR54 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.42■□□□□ 0.54
Rif1Q6PR54 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rif1Q6PR54 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rif1Q6PR54 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rif1Q6PR54 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Rif1Q6PR54 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rif1Q6PR54 Gm12933-201ENSMUST00000120203 872 ntBASIC18.41■□□□□ 0.54
Rif1Q6PR54 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rif1Q6PR54 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Rif1Q6PR54 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rif1Q6PR54 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rif1Q6PR54 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rif1Q6PR54 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rif1Q6PR54 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.4■□□□□ 0.54
Rif1Q6PR54 Gm43017-201ENSMUST00000198296 752 ntBASIC18.4■□□□□ 0.54
Rif1Q6PR54 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rif1Q6PR54 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rif1Q6PR54 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rif1Q6PR54 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Rif1Q6PR54 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rif1Q6PR54 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rif1Q6PR54 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rif1Q6PR54 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.39■□□□□ 0.53
Rif1Q6PR54 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rif1Q6PR54 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rif1Q6PR54 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rif1Q6PR54 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.39■□□□□ 0.53
Rif1Q6PR54 Gm10252-201ENSMUST00000209541 832 ntBASIC18.39■□□□□ 0.53
Rif1Q6PR54 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rif1Q6PR54 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rif1Q6PR54 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.38■□□□□ 0.53
Rif1Q6PR54 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rif1Q6PR54 Gm22240-201ENSMUST00000175225 82 ntBASIC18.38■□□□□ 0.53
Rif1Q6PR54 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.38■□□□□ 0.53
Rif1Q6PR54 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rif1Q6PR54 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rif1Q6PR54 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rif1Q6PR54 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms