Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc46a1Q6PEM8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.82■□□□□ 0.6
Slc46a1Q6PEM8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
Slc46a1Q6PEM8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Slc46a1Q6PEM8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc46a1Q6PEM8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc46a1Q6PEM8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.81■□□□□ 0.6
Slc46a1Q6PEM8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.81■□□□□ 0.6
Slc46a1Q6PEM8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc46a1Q6PEM8 Etf1-202ENSMUST00000180351 108 ntBASIC18.8■□□□□ 0.6
Slc46a1Q6PEM8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Slc46a1Q6PEM8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc46a1Q6PEM8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Slc46a1Q6PEM8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc46a1Q6PEM8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc46a1Q6PEM8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Slc46a1Q6PEM8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Slc46a1Q6PEM8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc46a1Q6PEM8 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc46a1Q6PEM8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc46a1Q6PEM8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc46a1Q6PEM8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Slc46a1Q6PEM8 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.79■□□□□ 0.6
Slc46a1Q6PEM8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Slc46a1Q6PEM8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Slc46a1Q6PEM8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.79■□□□□ 0.6
Slc46a1Q6PEM8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.79■□□□□ 0.6
Slc46a1Q6PEM8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.79■□□□□ 0.6
Slc46a1Q6PEM8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Slc46a1Q6PEM8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc46a1Q6PEM8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc46a1Q6PEM8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc46a1Q6PEM8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc46a1Q6PEM8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc46a1Q6PEM8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.79■□□□□ 0.6
Slc46a1Q6PEM8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc46a1Q6PEM8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc46a1Q6PEM8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc46a1Q6PEM8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Slc46a1Q6PEM8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Slc46a1Q6PEM8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Slc46a1Q6PEM8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc46a1Q6PEM8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Slc46a1Q6PEM8 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc46a1Q6PEM8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc46a1Q6PEM8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc46a1Q6PEM8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc46a1Q6PEM8 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.76■□□□□ 0.59
Slc46a1Q6PEM8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc46a1Q6PEM8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Slc46a1Q6PEM8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Slc46a1Q6PEM8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc46a1Q6PEM8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Slc46a1Q6PEM8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc46a1Q6PEM8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.76■□□□□ 0.59
Slc46a1Q6PEM8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Slc46a1Q6PEM8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc46a1Q6PEM8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc46a1Q6PEM8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.75■□□□□ 0.59
Slc46a1Q6PEM8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.75■□□□□ 0.59
Slc46a1Q6PEM8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.75■□□□□ 0.59
Slc46a1Q6PEM8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Slc46a1Q6PEM8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc46a1Q6PEM8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc46a1Q6PEM8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc46a1Q6PEM8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Slc46a1Q6PEM8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Slc46a1Q6PEM8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc46a1Q6PEM8 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.73■□□□□ 0.59
Slc46a1Q6PEM8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.73■□□□□ 0.59
Slc46a1Q6PEM8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.73■□□□□ 0.59
Slc46a1Q6PEM8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Slc46a1Q6PEM8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.73■□□□□ 0.59
Slc46a1Q6PEM8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc46a1Q6PEM8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Slc46a1Q6PEM8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc46a1Q6PEM8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc46a1Q6PEM8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc46a1Q6PEM8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Slc46a1Q6PEM8 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc46a1Q6PEM8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.72■□□□□ 0.59
Slc46a1Q6PEM8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc46a1Q6PEM8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc46a1Q6PEM8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc46a1Q6PEM8 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc46a1Q6PEM8 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.71■□□□□ 0.59
Slc46a1Q6PEM8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc46a1Q6PEM8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Slc46a1Q6PEM8 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc46a1Q6PEM8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc46a1Q6PEM8 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.7■□□□□ 0.58
Slc46a1Q6PEM8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Slc46a1Q6PEM8 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc46a1Q6PEM8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Slc46a1Q6PEM8 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc46a1Q6PEM8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc46a1Q6PEM8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.7■□□□□ 0.58
Slc46a1Q6PEM8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.7■□□□□ 0.58
Slc46a1Q6PEM8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc46a1Q6PEM8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms