Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Dhx40Q6PE54 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Dhx40Q6PE54 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
Dhx40Q6PE54 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Dhx40Q6PE54 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC23.87■■□□□ 1.41
Dhx40Q6PE54 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Dhx40Q6PE54 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Dhx40Q6PE54 Hsf1-207ENSMUST00000228371 2102 ntBASIC23.87■■□□□ 1.41
Dhx40Q6PE54 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Dhx40Q6PE54 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.86■■□□□ 1.41
Dhx40Q6PE54 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.86■■□□□ 1.41
Dhx40Q6PE54 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Dhx40Q6PE54 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Dhx40Q6PE54 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Dhx40Q6PE54 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Dhx40Q6PE54 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.85■■□□□ 1.41
Dhx40Q6PE54 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Dhx40Q6PE54 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Dhx40Q6PE54 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC23.84■■□□□ 1.41
Dhx40Q6PE54 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC23.84■■□□□ 1.41
Dhx40Q6PE54 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Dhx40Q6PE54 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.84■■□□□ 1.41
Dhx40Q6PE54 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC23.84■■□□□ 1.41
Dhx40Q6PE54 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Dhx40Q6PE54 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Dhx40Q6PE54 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Dhx40Q6PE54 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
Dhx40Q6PE54 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Dhx40Q6PE54 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Dhx40Q6PE54 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Dhx40Q6PE54 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Dhx40Q6PE54 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Dhx40Q6PE54 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
Dhx40Q6PE54 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Dhx40Q6PE54 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Dhx40Q6PE54 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC23.81■■□□□ 1.4
Dhx40Q6PE54 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Dhx40Q6PE54 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Dhx40Q6PE54 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Dhx40Q6PE54 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Dhx40Q6PE54 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Dhx40Q6PE54 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Dhx40Q6PE54 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Dhx40Q6PE54 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Dhx40Q6PE54 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Dhx40Q6PE54 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Dhx40Q6PE54 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Dhx40Q6PE54 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC23.78■■□□□ 1.4
Dhx40Q6PE54 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC23.78■■□□□ 1.4
Dhx40Q6PE54 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.78■■□□□ 1.4
Dhx40Q6PE54 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Dhx40Q6PE54 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Dhx40Q6PE54 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Dhx40Q6PE54 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Dhx40Q6PE54 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Dhx40Q6PE54 Gm44428-201ENSMUST00000204474 874 ntBASIC23.77■■□□□ 1.4
Dhx40Q6PE54 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Dhx40Q6PE54 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.77■■□□□ 1.4
Dhx40Q6PE54 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Dhx40Q6PE54 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Dhx40Q6PE54 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Dhx40Q6PE54 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Dhx40Q6PE54 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Dhx40Q6PE54 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.76■■□□□ 1.39
Dhx40Q6PE54 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Dhx40Q6PE54 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Dhx40Q6PE54 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Dhx40Q6PE54 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC23.76■■□□□ 1.39
Dhx40Q6PE54 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Dhx40Q6PE54 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Dhx40Q6PE54 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Dhx40Q6PE54 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Dhx40Q6PE54 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Dhx40Q6PE54 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.75■■□□□ 1.39
Dhx40Q6PE54 Gm6311-201ENSMUST00000073790 878 ntBASIC23.75■■□□□ 1.39
Dhx40Q6PE54 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Dhx40Q6PE54 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
Dhx40Q6PE54 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
Dhx40Q6PE54 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Dhx40Q6PE54 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Dhx40Q6PE54 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Dhx40Q6PE54 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC23.74■■□□□ 1.39
Dhx40Q6PE54 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Dhx40Q6PE54 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Dhx40Q6PE54 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Dhx40Q6PE54 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Dhx40Q6PE54 Notumos-201ENSMUST00000151998 2659 ntBASIC23.73■■□□□ 1.39
Dhx40Q6PE54 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Dhx40Q6PE54 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Dhx40Q6PE54 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Dhx40Q6PE54 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Dhx40Q6PE54 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
Dhx40Q6PE54 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Dhx40Q6PE54 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Dhx40Q6PE54 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC23.72■■□□□ 1.39
Dhx40Q6PE54 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Dhx40Q6PE54 Kdm3b-204ENSMUST00000224715 2032 ntBASIC23.71■■□□□ 1.39
Dhx40Q6PE54 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Dhx40Q6PE54 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Dhx40Q6PE54 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 8.6 ms