Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdhga7Q6DD96 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhga7Q6DD96 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
Pcdhga7Q6DD96 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhga7Q6DD96 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhga7Q6DD96 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhga7Q6DD96 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Pcdhga7Q6DD96 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhga7Q6DD96 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhga7Q6DD96 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.75■□□□□ 0.91
Pcdhga7Q6DD96 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.75■□□□□ 0.91
Pcdhga7Q6DD96 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.75■□□□□ 0.91
Pcdhga7Q6DD96 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhga7Q6DD96 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhga7Q6DD96 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhga7Q6DD96 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Pcdhga7Q6DD96 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhga7Q6DD96 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.74■□□□□ 0.91
Pcdhga7Q6DD96 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhga7Q6DD96 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Pcdhga7Q6DD96 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhga7Q6DD96 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhga7Q6DD96 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhga7Q6DD96 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhga7Q6DD96 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.73■□□□□ 0.91
Pcdhga7Q6DD96 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Pcdhga7Q6DD96 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhga7Q6DD96 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhga7Q6DD96 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhga7Q6DD96 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.73■□□□□ 0.91
Pcdhga7Q6DD96 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhga7Q6DD96 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Pcdhga7Q6DD96 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhga7Q6DD96 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Pcdhga7Q6DD96 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhga7Q6DD96 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhga7Q6DD96 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Pcdhga7Q6DD96 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhga7Q6DD96 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhga7Q6DD96 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhga7Q6DD96 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.71■□□□□ 0.91
Pcdhga7Q6DD96 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhga7Q6DD96 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhga7Q6DD96 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Pcdhga7Q6DD96 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhga7Q6DD96 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhga7Q6DD96 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhga7Q6DD96 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Pcdhga7Q6DD96 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhga7Q6DD96 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhga7Q6DD96 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhga7Q6DD96 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhga7Q6DD96 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Pcdhga7Q6DD96 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhga7Q6DD96 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhga7Q6DD96 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhga7Q6DD96 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhga7Q6DD96 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhga7Q6DD96 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhga7Q6DD96 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhga7Q6DD96 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga7Q6DD96 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga7Q6DD96 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga7Q6DD96 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Pcdhga7Q6DD96 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga7Q6DD96 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.67■□□□□ 0.9
Pcdhga7Q6DD96 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhga7Q6DD96 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhga7Q6DD96 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Pcdhga7Q6DD96 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhga7Q6DD96 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhga7Q6DD96 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhga7Q6DD96 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga7Q6DD96 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Pcdhga7Q6DD96 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga7Q6DD96 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga7Q6DD96 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga7Q6DD96 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga7Q6DD96 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga7Q6DD96 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.65■□□□□ 0.9
Pcdhga7Q6DD96 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.65■□□□□ 0.9
Pcdhga7Q6DD96 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga7Q6DD96 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga7Q6DD96 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhga7Q6DD96 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhga7Q6DD96 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhga7Q6DD96 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhga7Q6DD96 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhga7Q6DD96 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga7Q6DD96 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhga7Q6DD96 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Pcdhga7Q6DD96 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.62■□□□□ 0.89
Pcdhga7Q6DD96 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhga7Q6DD96 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhga7Q6DD96 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.61■□□□□ 0.89
Pcdhga7Q6DD96 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga7Q6DD96 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga7Q6DD96 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga7Q6DD96 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.61■□□□□ 0.89
Pcdhga7Q6DD96 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms