Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Scube3Q66PY1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22.58■■□□□ 1.21
Scube3Q66PY1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.2
Scube3Q66PY1 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Scube3Q66PY1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Scube3Q66PY1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Scube3Q66PY1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Scube3Q66PY1 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Scube3Q66PY1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Scube3Q66PY1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Scube3Q66PY1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Scube3Q66PY1 Gm5812-201ENSMUST00000061073 957 ntBASIC22.57■■□□□ 1.2
Scube3Q66PY1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC22.57■■□□□ 1.2
Scube3Q66PY1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.57■■□□□ 1.2
Scube3Q66PY1 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Scube3Q66PY1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Scube3Q66PY1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC22.56■■□□□ 1.2
Scube3Q66PY1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.56■■□□□ 1.2
Scube3Q66PY1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC22.56■■□□□ 1.2
Scube3Q66PY1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.56■■□□□ 1.2
Scube3Q66PY1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Scube3Q66PY1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Scube3Q66PY1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Scube3Q66PY1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Scube3Q66PY1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC22.55■■□□□ 1.2
Scube3Q66PY1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.55■■□□□ 1.2
Scube3Q66PY1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Scube3Q66PY1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.55■■□□□ 1.2
Scube3Q66PY1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Scube3Q66PY1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Scube3Q66PY1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Scube3Q66PY1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Scube3Q66PY1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scube3Q66PY1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scube3Q66PY1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scube3Q66PY1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Scube3Q66PY1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.54■■□□□ 1.2
Scube3Q66PY1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Scube3Q66PY1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
Scube3Q66PY1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scube3Q66PY1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Scube3Q66PY1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Scube3Q66PY1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Scube3Q66PY1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC22.53■■□□□ 1.2
Scube3Q66PY1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.53■■□□□ 1.2
Scube3Q66PY1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Scube3Q66PY1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Scube3Q66PY1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Scube3Q66PY1 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.53■■□□□ 1.2
Scube3Q66PY1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC22.53■■□□□ 1.2
Scube3Q66PY1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Scube3Q66PY1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Scube3Q66PY1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.52■■□□□ 1.2
Scube3Q66PY1 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Scube3Q66PY1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Scube3Q66PY1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Scube3Q66PY1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Scube3Q66PY1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Scube3Q66PY1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Scube3Q66PY1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Scube3Q66PY1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Scube3Q66PY1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Scube3Q66PY1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Scube3Q66PY1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
Scube3Q66PY1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Scube3Q66PY1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Scube3Q66PY1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Scube3Q66PY1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Scube3Q66PY1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.49■■□□□ 1.19
Scube3Q66PY1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Scube3Q66PY1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.49■■□□□ 1.19
Scube3Q66PY1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Scube3Q66PY1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Scube3Q66PY1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Scube3Q66PY1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Scube3Q66PY1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Scube3Q66PY1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Scube3Q66PY1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Scube3Q66PY1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC22.48■■□□□ 1.19
Scube3Q66PY1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Scube3Q66PY1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Scube3Q66PY1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Scube3Q66PY1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Scube3Q66PY1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Scube3Q66PY1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.47■■□□□ 1.19
Scube3Q66PY1 Gm5522-201ENSMUST00000189483 1242 ntBASIC22.47■■□□□ 1.19
Scube3Q66PY1 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Scube3Q66PY1 Gm15546-201ENSMUST00000122095 826 ntBASIC22.46■■□□□ 1.19
Scube3Q66PY1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Scube3Q66PY1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Scube3Q66PY1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Scube3Q66PY1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Scube3Q66PY1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.19
Scube3Q66PY1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Scube3Q66PY1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Scube3Q66PY1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
Scube3Q66PY1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Scube3Q66PY1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Scube3Q66PY1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Scube3Q66PY1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms