Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.05■□□□□ 0.96
VclQ64727 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VclQ64727 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
VclQ64727 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VclQ64727 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VclQ64727 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
VclQ64727 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.04■□□□□ 0.96
VclQ64727 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.04■□□□□ 0.96
VclQ64727 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VclQ64727 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
VclQ64727 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VclQ64727 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VclQ64727 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
VclQ64727 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VclQ64727 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
VclQ64727 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
VclQ64727 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
VclQ64727 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
VclQ64727 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VclQ64727 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
VclQ64727 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
VclQ64727 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
VclQ64727 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
VclQ64727 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.02■□□□□ 0.96
VclQ64727 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
VclQ64727 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VclQ64727 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VclQ64727 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
VclQ64727 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.01■□□□□ 0.95
VclQ64727 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VclQ64727 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
VclQ64727 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VclQ64727 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.01■□□□□ 0.95
VclQ64727 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VclQ64727 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
VclQ64727 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
VclQ64727 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VclQ64727 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21■□□□□ 0.95
VclQ64727 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21■□□□□ 0.95
VclQ64727 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21■□□□□ 0.95
VclQ64727 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VclQ64727 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
VclQ64727 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VclQ64727 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VclQ64727 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
VclQ64727 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VclQ64727 Gm15546-201ENSMUST00000122095 826 ntBASIC20.99■□□□□ 0.95
VclQ64727 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.99■□□□□ 0.95
VclQ64727 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VclQ64727 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VclQ64727 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
VclQ64727 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
VclQ64727 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VclQ64727 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.98■□□□□ 0.95
VclQ64727 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VclQ64727 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
VclQ64727 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VclQ64727 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VclQ64727 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VclQ64727 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.97■□□□□ 0.95
VclQ64727 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VclQ64727 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VclQ64727 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VclQ64727 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
VclQ64727 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
VclQ64727 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
VclQ64727 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.96■□□□□ 0.95
VclQ64727 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
VclQ64727 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
VclQ64727 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VclQ64727 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VclQ64727 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
VclQ64727 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.95■□□□□ 0.94
VclQ64727 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VclQ64727 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
VclQ64727 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
VclQ64727 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VclQ64727 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
VclQ64727 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
VclQ64727 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VclQ64727 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
VclQ64727 Gm15820-201ENSMUST00000201566 728 ntBASIC20.94■□□□□ 0.94
VclQ64727 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.94■□□□□ 0.94
VclQ64727 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VclQ64727 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
VclQ64727 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.93■□□□□ 0.94
VclQ64727 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
VclQ64727 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.93■□□□□ 0.94
VclQ64727 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
VclQ64727 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.93■□□□□ 0.94
VclQ64727 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
VclQ64727 Gm10232-201ENSMUST00000089221 720 ntBASIC20.93■□□□□ 0.94
VclQ64727 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VclQ64727 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VclQ64727 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VclQ64727 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VclQ64727 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VclQ64727 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.92■□□□□ 0.94
VclQ64727 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VclQ64727 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms