Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Commd3Q63829 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Commd3Q63829 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Commd3Q63829 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Commd3Q63829 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Commd3Q63829 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Commd3Q63829 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Commd3Q63829 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Commd3Q63829 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Commd3Q63829 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Commd3Q63829 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Commd3Q63829 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Commd3Q63829 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Commd3Q63829 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Commd3Q63829 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Commd3Q63829 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Commd3Q63829 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Commd3Q63829 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Commd3Q63829 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.77■□□□□ 0.44
Commd3Q63829 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Commd3Q63829 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Commd3Q63829 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.77■□□□□ 0.43
Commd3Q63829 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Commd3Q63829 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.76■□□□□ 0.43
Commd3Q63829 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Commd3Q63829 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Commd3Q63829 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Commd3Q63829 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.76■□□□□ 0.43
Commd3Q63829 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.76■□□□□ 0.43
Commd3Q63829 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Commd3Q63829 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Commd3Q63829 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Commd3Q63829 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Commd3Q63829 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Commd3Q63829 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Commd3Q63829 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.75■□□□□ 0.43
Commd3Q63829 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Commd3Q63829 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Commd3Q63829 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Commd3Q63829 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Commd3Q63829 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Commd3Q63829 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Commd3Q63829 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Commd3Q63829 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Commd3Q63829 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Commd3Q63829 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Commd3Q63829 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.73■□□□□ 0.43
Commd3Q63829 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Commd3Q63829 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Commd3Q63829 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Commd3Q63829 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.73■□□□□ 0.43
Commd3Q63829 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Commd3Q63829 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Commd3Q63829 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Commd3Q63829 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Commd3Q63829 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.72■□□□□ 0.43
Commd3Q63829 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Commd3Q63829 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Commd3Q63829 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Commd3Q63829 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Commd3Q63829 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Commd3Q63829 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Commd3Q63829 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Commd3Q63829 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Commd3Q63829 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Commd3Q63829 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Commd3Q63829 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Commd3Q63829 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Commd3Q63829 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Commd3Q63829 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Commd3Q63829 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Commd3Q63829 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Commd3Q63829 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Commd3Q63829 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.7■□□□□ 0.42
Commd3Q63829 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Commd3Q63829 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Commd3Q63829 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Commd3Q63829 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Commd3Q63829 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Commd3Q63829 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Commd3Q63829 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Commd3Q63829 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Commd3Q63829 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Commd3Q63829 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Commd3Q63829 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Commd3Q63829 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Commd3Q63829 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Commd3Q63829 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Commd3Q63829 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Commd3Q63829 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Commd3Q63829 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Commd3Q63829 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Commd3Q63829 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Commd3Q63829 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Commd3Q63829 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Commd3Q63829 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Commd3Q63829 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Commd3Q63829 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.68■□□□□ 0.42
Commd3Q63829 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Commd3Q63829 Nkain2-201ENSMUST00000092602 558 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms