Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC26.59■■□□□ 1.85
Trim27Q62158 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Trim27Q62158 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
Trim27Q62158 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Trim27Q62158 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Trim27Q62158 Gm5067-201ENSMUST00000170449 1009 ntBASIC26.58■■□□□ 1.85
Trim27Q62158 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC26.58■■□□□ 1.85
Trim27Q62158 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC26.58■■□□□ 1.84
Trim27Q62158 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Trim27Q62158 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC26.57■■□□□ 1.84
Trim27Q62158 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Trim27Q62158 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Trim27Q62158 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Trim27Q62158 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC26.57■■□□□ 1.84
Trim27Q62158 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Trim27Q62158 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Trim27Q62158 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Trim27Q62158 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Trim27Q62158 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Trim27Q62158 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Trim27Q62158 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Trim27Q62158 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Trim27Q62158 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC26.55■■□□□ 1.84
Trim27Q62158 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
Trim27Q62158 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Trim27Q62158 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Trim27Q62158 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Trim27Q62158 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trim27Q62158 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
Trim27Q62158 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trim27Q62158 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trim27Q62158 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
Trim27Q62158 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Trim27Q62158 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Trim27Q62158 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Trim27Q62158 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Trim27Q62158 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
Trim27Q62158 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
Trim27Q62158 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Trim27Q62158 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Trim27Q62158 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Trim27Q62158 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC26.52■■□□□ 1.84
Trim27Q62158 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
Trim27Q62158 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Trim27Q62158 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Trim27Q62158 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Trim27Q62158 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
Trim27Q62158 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC26.52■■□□□ 1.84
Trim27Q62158 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.84
Trim27Q62158 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.84
Trim27Q62158 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Trim27Q62158 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Trim27Q62158 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC26.51■■□□□ 1.83
Trim27Q62158 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC26.51■■□□□ 1.83
Trim27Q62158 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Trim27Q62158 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
Trim27Q62158 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC26.5■■□□□ 1.83
Trim27Q62158 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
Trim27Q62158 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Trim27Q62158 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Trim27Q62158 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Trim27Q62158 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Trim27Q62158 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC26.49■■□□□ 1.83
Trim27Q62158 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
Trim27Q62158 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Trim27Q62158 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
Trim27Q62158 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trim27Q62158 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trim27Q62158 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Trim27Q62158 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC26.48■■□□□ 1.83
Trim27Q62158 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Trim27Q62158 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Trim27Q62158 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Trim27Q62158 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC26.47■■□□□ 1.83
Trim27Q62158 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Trim27Q62158 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Trim27Q62158 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
Trim27Q62158 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Trim27Q62158 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Trim27Q62158 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Trim27Q62158 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Trim27Q62158 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Trim27Q62158 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC26.46■■□□□ 1.83
Trim27Q62158 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Trim27Q62158 Gm37415-201ENSMUST00000192265 2054 ntBASIC26.46■■□□□ 1.83
Trim27Q62158 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Trim27Q62158 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Trim27Q62158 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.83
Trim27Q62158 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Trim27Q62158 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC26.45■■□□□ 1.82
Trim27Q62158 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC26.45■■□□□ 1.82
Trim27Q62158 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC26.45■■□□□ 1.82
Trim27Q62158 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Trim27Q62158 Gm42418-201ENSMUST00000182010 1831 ntBASIC26.44■■□□□ 1.82
Trim27Q62158 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Trim27Q62158 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Trim27Q62158 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
Trim27Q62158 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC26.44■■□□□ 1.82
Trim27Q62158 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trim27Q62158 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms