Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC15.55■□□□□ 0.08
Foxc1Q61572 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Foxc1Q61572 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Foxc1Q61572 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Foxc1Q61572 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC15.55■□□□□ 0.08
Foxc1Q61572 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Foxc1Q61572 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Foxc1Q61572 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Foxc1Q61572 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC15.54■□□□□ 0.08
Foxc1Q61572 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Foxc1Q61572 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Foxc1Q61572 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Foxc1Q61572 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC15.54■□□□□ 0.08
Foxc1Q61572 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Foxc1Q61572 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Foxc1Q61572 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Foxc1Q61572 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Foxc1Q61572 Gm22567-201ENSMUST00000175542 342 ntBASIC15.53■□□□□ 0.08
Foxc1Q61572 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Foxc1Q61572 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Foxc1Q61572 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC15.52■□□□□ 0.08
Foxc1Q61572 Gm15820-201ENSMUST00000201566 728 ntBASIC15.52■□□□□ 0.08
Foxc1Q61572 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC15.52■□□□□ 0.08
Foxc1Q61572 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC15.52■□□□□ 0.08
Foxc1Q61572 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Foxc1Q61572 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Foxc1Q61572 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Foxc1Q61572 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Foxc1Q61572 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Foxc1Q61572 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Foxc1Q61572 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Foxc1Q61572 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Foxc1Q61572 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Foxc1Q61572 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Foxc1Q61572 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Foxc1Q61572 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Foxc1Q61572 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Foxc1Q61572 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Foxc1Q61572 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC15.5■□□□□ 0.07
Foxc1Q61572 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Foxc1Q61572 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Foxc1Q61572 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Foxc1Q61572 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Foxc1Q61572 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Foxc1Q61572 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Foxc1Q61572 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Foxc1Q61572 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Foxc1Q61572 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Foxc1Q61572 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC15.49■□□□□ 0.07
Foxc1Q61572 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.49■□□□□ 0.07
Foxc1Q61572 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.49■□□□□ 0.07
Foxc1Q61572 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Foxc1Q61572 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Foxc1Q61572 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Foxc1Q61572 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Foxc1Q61572 Gm6934-201ENSMUST00000194780 1905 ntBASIC15.49■□□□□ 0.07
Foxc1Q61572 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Foxc1Q61572 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Foxc1Q61572 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC15.48■□□□□ 0.07
Foxc1Q61572 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Foxc1Q61572 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC15.48■□□□□ 0.07
Foxc1Q61572 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Foxc1Q61572 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Foxc1Q61572 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Foxc1Q61572 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Foxc1Q61572 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC15.47■□□□□ 0.07
Foxc1Q61572 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC15.47■□□□□ 0.07
Foxc1Q61572 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC15.47■□□□□ 0.07
Foxc1Q61572 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Foxc1Q61572 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Foxc1Q61572 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Foxc1Q61572 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Foxc1Q61572 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
Foxc1Q61572 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Foxc1Q61572 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Foxc1Q61572 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Foxc1Q61572 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC15.46■□□□□ 0.07
Foxc1Q61572 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Foxc1Q61572 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Foxc1Q61572 Nsd1-203ENSMUST00000224156 1149 ntBASIC15.46■□□□□ 0.07
Foxc1Q61572 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
Foxc1Q61572 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Foxc1Q61572 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Foxc1Q61572 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Foxc1Q61572 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Foxc1Q61572 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Foxc1Q61572 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Foxc1Q61572 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Foxc1Q61572 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Foxc1Q61572 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Foxc1Q61572 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Foxc1Q61572 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Foxc1Q61572 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Foxc1Q61572 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Foxc1Q61572 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.45■□□□□ 0.06
Foxc1Q61572 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Foxc1Q61572 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Foxc1Q61572 AC117245.4-201ENSMUST00000217388 1646 ntBASIC15.45■□□□□ 0.06
Foxc1Q61572 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Foxc1Q61572 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms