Protein–RNA interactions for Protein: Q61239

Fnta, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FntaQ61239 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
FntaQ61239 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
FntaQ61239 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
FntaQ61239 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.66■■□□□ 1.22
FntaQ61239 Gm7432-201ENSMUST00000210343 879 ntBASIC22.66■■□□□ 1.22
FntaQ61239 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FntaQ61239 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FntaQ61239 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FntaQ61239 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FntaQ61239 AC115037.1-201ENSMUST00000223391 2173 ntBASIC22.65■■□□□ 1.22
FntaQ61239 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
FntaQ61239 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
FntaQ61239 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
FntaQ61239 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
FntaQ61239 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
FntaQ61239 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
FntaQ61239 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
FntaQ61239 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
FntaQ61239 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
FntaQ61239 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
FntaQ61239 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
FntaQ61239 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
FntaQ61239 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
FntaQ61239 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
FntaQ61239 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
FntaQ61239 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
FntaQ61239 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
FntaQ61239 Gm11599-201ENSMUST00000118720 878 ntBASIC22.61■■□□□ 1.21
FntaQ61239 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
FntaQ61239 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
FntaQ61239 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
FntaQ61239 Gm4430-201ENSMUST00000192413 1943 ntBASIC22.61■■□□□ 1.21
FntaQ61239 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
FntaQ61239 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
FntaQ61239 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
FntaQ61239 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
FntaQ61239 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
FntaQ61239 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
FntaQ61239 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC22.58■■□□□ 1.21
FntaQ61239 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
FntaQ61239 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
FntaQ61239 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
FntaQ61239 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
FntaQ61239 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
FntaQ61239 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
FntaQ61239 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
FntaQ61239 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
FntaQ61239 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
FntaQ61239 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
FntaQ61239 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
FntaQ61239 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
FntaQ61239 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
FntaQ61239 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC22.56■■□□□ 1.2
FntaQ61239 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
FntaQ61239 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
FntaQ61239 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
FntaQ61239 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
FntaQ61239 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
FntaQ61239 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
FntaQ61239 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
FntaQ61239 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
FntaQ61239 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
FntaQ61239 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.55■■□□□ 1.2
FntaQ61239 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
FntaQ61239 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
FntaQ61239 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC22.55■■□□□ 1.2
FntaQ61239 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC22.55■■□□□ 1.2
FntaQ61239 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
FntaQ61239 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
FntaQ61239 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
FntaQ61239 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FntaQ61239 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
FntaQ61239 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FntaQ61239 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
FntaQ61239 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
FntaQ61239 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FntaQ61239 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
FntaQ61239 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
FntaQ61239 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.54■■□□□ 1.2
FntaQ61239 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
FntaQ61239 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FntaQ61239 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FntaQ61239 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
FntaQ61239 AC117245.4-201ENSMUST00000217388 1646 ntBASIC22.53■■□□□ 1.2
FntaQ61239 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
FntaQ61239 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
FntaQ61239 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
FntaQ61239 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.53■■□□□ 1.2
FntaQ61239 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
FntaQ61239 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
FntaQ61239 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
FntaQ61239 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
FntaQ61239 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
FntaQ61239 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
FntaQ61239 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.52■■□□□ 1.2
FntaQ61239 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
FntaQ61239 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
FntaQ61239 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
FntaQ61239 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC22.51■■□□□ 1.19
FntaQ61239 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.51■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms