Protein–RNA interactions for Protein: Q61056

Trpc1, Short transient receptor potential channel 1, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpc1Q61056 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.75■□□□□ 0.91
Trpc1Q61056 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trpc1Q61056 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trpc1Q61056 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trpc1Q61056 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trpc1Q61056 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trpc1Q61056 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trpc1Q61056 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.75■□□□□ 0.91
Trpc1Q61056 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trpc1Q61056 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trpc1Q61056 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trpc1Q61056 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trpc1Q61056 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trpc1Q61056 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trpc1Q61056 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trpc1Q61056 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trpc1Q61056 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trpc1Q61056 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.73■□□□□ 0.91
Trpc1Q61056 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trpc1Q61056 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.73■□□□□ 0.91
Trpc1Q61056 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trpc1Q61056 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.73■□□□□ 0.91
Trpc1Q61056 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.73■□□□□ 0.91
Trpc1Q61056 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trpc1Q61056 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trpc1Q61056 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trpc1Q61056 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trpc1Q61056 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trpc1Q61056 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trpc1Q61056 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trpc1Q61056 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trpc1Q61056 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Trpc1Q61056 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trpc1Q61056 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Trpc1Q61056 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trpc1Q61056 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
Trpc1Q61056 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trpc1Q61056 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.71■□□□□ 0.91
Trpc1Q61056 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
Trpc1Q61056 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trpc1Q61056 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trpc1Q61056 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trpc1Q61056 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trpc1Q61056 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.7■□□□□ 0.9
Trpc1Q61056 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trpc1Q61056 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Trpc1Q61056 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trpc1Q61056 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trpc1Q61056 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trpc1Q61056 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.69■□□□□ 0.9
Trpc1Q61056 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.69■□□□□ 0.9
Trpc1Q61056 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trpc1Q61056 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trpc1Q61056 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trpc1Q61056 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trpc1Q61056 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Trpc1Q61056 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trpc1Q61056 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Trpc1Q61056 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trpc1Q61056 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Trpc1Q61056 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trpc1Q61056 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trpc1Q61056 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trpc1Q61056 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trpc1Q61056 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trpc1Q61056 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trpc1Q61056 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Trpc1Q61056 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trpc1Q61056 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trpc1Q61056 Cap2-205ENSMUST00000225824 1634 ntBASIC20.66■□□□□ 0.9
Trpc1Q61056 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.66■□□□□ 0.9
Trpc1Q61056 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trpc1Q61056 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trpc1Q61056 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trpc1Q61056 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.66■□□□□ 0.9
Trpc1Q61056 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trpc1Q61056 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Trpc1Q61056 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trpc1Q61056 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trpc1Q61056 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trpc1Q61056 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Trpc1Q61056 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trpc1Q61056 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.65■□□□□ 0.9
Trpc1Q61056 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trpc1Q61056 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
Trpc1Q61056 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trpc1Q61056 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trpc1Q61056 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Trpc1Q61056 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trpc1Q61056 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Trpc1Q61056 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trpc1Q61056 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Trpc1Q61056 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trpc1Q61056 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trpc1Q61056 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trpc1Q61056 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trpc1Q61056 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trpc1Q61056 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trpc1Q61056 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trpc1Q61056 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms