Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnfaip3Q60769 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.16■□□□□ 0.82
Tnfaip3Q60769 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnfaip3Q60769 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnfaip3Q60769 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnfaip3Q60769 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfaip3Q60769 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.15■□□□□ 0.82
Tnfaip3Q60769 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfaip3Q60769 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfaip3Q60769 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfaip3Q60769 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfaip3Q60769 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.15■□□□□ 0.82
Tnfaip3Q60769 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfaip3Q60769 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tnfaip3Q60769 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.14■□□□□ 0.81
Tnfaip3Q60769 Gm10232-201ENSMUST00000089221 720 ntBASIC20.14■□□□□ 0.81
Tnfaip3Q60769 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Tnfaip3Q60769 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnfaip3Q60769 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnfaip3Q60769 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnfaip3Q60769 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnfaip3Q60769 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnfaip3Q60769 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnfaip3Q60769 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.13■□□□□ 0.81
Tnfaip3Q60769 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tnfaip3Q60769 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnfaip3Q60769 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnfaip3Q60769 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnfaip3Q60769 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnfaip3Q60769 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnfaip3Q60769 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.12■□□□□ 0.81
Tnfaip3Q60769 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Tnfaip3Q60769 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Tnfaip3Q60769 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Tnfaip3Q60769 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnfaip3Q60769 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnfaip3Q60769 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnfaip3Q60769 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnfaip3Q60769 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnfaip3Q60769 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnfaip3Q60769 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnfaip3Q60769 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Tnfaip3Q60769 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.11■□□□□ 0.81
Tnfaip3Q60769 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnfaip3Q60769 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnfaip3Q60769 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.11■□□□□ 0.81
Tnfaip3Q60769 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.11■□□□□ 0.81
Tnfaip3Q60769 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Tnfaip3Q60769 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnfaip3Q60769 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Tnfaip3Q60769 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Tnfaip3Q60769 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.1■□□□□ 0.81
Tnfaip3Q60769 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfaip3Q60769 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfaip3Q60769 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfaip3Q60769 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfaip3Q60769 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfaip3Q60769 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfaip3Q60769 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.09■□□□□ 0.81
Tnfaip3Q60769 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfaip3Q60769 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
Tnfaip3Q60769 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfaip3Q60769 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Tnfaip3Q60769 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tnfaip3Q60769 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tnfaip3Q60769 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Tnfaip3Q60769 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.08■□□□□ 0.81
Tnfaip3Q60769 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.08■□□□□ 0.81
Tnfaip3Q60769 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tnfaip3Q60769 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Tnfaip3Q60769 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tnfaip3Q60769 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tnfaip3Q60769 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tnfaip3Q60769 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tnfaip3Q60769 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.06■□□□□ 0.8
Tnfaip3Q60769 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tnfaip3Q60769 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tnfaip3Q60769 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Tnfaip3Q60769 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfaip3Q60769 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfaip3Q60769 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfaip3Q60769 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfaip3Q60769 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Tnfaip3Q60769 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfaip3Q60769 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfaip3Q60769 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.05■□□□□ 0.8
Tnfaip3Q60769 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfaip3Q60769 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfaip3Q60769 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Tnfaip3Q60769 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tnfaip3Q60769 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.04■□□□□ 0.8
Tnfaip3Q60769 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tnfaip3Q60769 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.04■□□□□ 0.8
Tnfaip3Q60769 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tnfaip3Q60769 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
Tnfaip3Q60769 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tnfaip3Q60769 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.04■□□□□ 0.8
Tnfaip3Q60769 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.04■□□□□ 0.8
Tnfaip3Q60769 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnfaip3Q60769 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms