Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC39■■■■□ 3.83
Pds5bQ4VA53 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
Pds5bQ4VA53 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC39■■■■□ 3.83
Pds5bQ4VA53 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
Pds5bQ4VA53 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
Pds5bQ4VA53 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC38.99■■■■□ 3.83
Pds5bQ4VA53 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC38.99■■■■□ 3.83
Pds5bQ4VA53 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC38.99■■■■□ 3.83
Pds5bQ4VA53 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC38.98■■■■□ 3.83
Pds5bQ4VA53 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC38.98■■■■□ 3.83
Pds5bQ4VA53 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC38.98■■■■□ 3.83
Pds5bQ4VA53 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC38.97■■■■□ 3.83
Pds5bQ4VA53 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC38.97■■■■□ 3.83
Pds5bQ4VA53 Gm7291-201ENSMUST00000199147 382 ntBASIC38.97■■■■□ 3.83
Pds5bQ4VA53 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC38.97■■■■□ 3.83
Pds5bQ4VA53 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC38.97■■■■□ 3.83
Pds5bQ4VA53 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC38.96■■■■□ 3.83
Pds5bQ4VA53 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC38.96■■■■□ 3.83
Pds5bQ4VA53 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC38.96■■■■□ 3.83
Pds5bQ4VA53 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC38.96■■■■□ 3.83
Pds5bQ4VA53 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC38.96■■■■□ 3.83
Pds5bQ4VA53 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC38.95■■■■□ 3.83
Pds5bQ4VA53 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC38.94■■■■□ 3.82
Pds5bQ4VA53 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC38.94■■■■□ 3.82
Pds5bQ4VA53 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC38.93■■■■□ 3.82
Pds5bQ4VA53 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
Pds5bQ4VA53 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC38.92■■■■□ 3.82
Pds5bQ4VA53 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC38.92■■■■□ 3.82
Pds5bQ4VA53 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
Pds5bQ4VA53 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC38.92■■■■□ 3.82
Pds5bQ4VA53 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
Pds5bQ4VA53 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC38.91■■■■□ 3.82
Pds5bQ4VA53 AC112142.1-201ENSMUST00000228796 918 ntBASIC38.91■■■■□ 3.82
Pds5bQ4VA53 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC38.9■■■■□ 3.82
Pds5bQ4VA53 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC38.9■■■■□ 3.82
Pds5bQ4VA53 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC38.9■■■■□ 3.82
Pds5bQ4VA53 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC38.9■■■■□ 3.82
Pds5bQ4VA53 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
Pds5bQ4VA53 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
Pds5bQ4VA53 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
Pds5bQ4VA53 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
Pds5bQ4VA53 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
Pds5bQ4VA53 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC38.89■■■■□ 3.82
Pds5bQ4VA53 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC38.88■■■■□ 3.81
Pds5bQ4VA53 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
Pds5bQ4VA53 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC38.87■■■■□ 3.81
Pds5bQ4VA53 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
Pds5bQ4VA53 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC38.86■■■■□ 3.81
Pds5bQ4VA53 Gm27011-201ENSMUST00000182352 972 ntBASIC38.86■■■■□ 3.81
Pds5bQ4VA53 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
Pds5bQ4VA53 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC38.86■■■■□ 3.81
Pds5bQ4VA53 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
Pds5bQ4VA53 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC38.85■■■■□ 3.81
Pds5bQ4VA53 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC38.85■■■■□ 3.81
Pds5bQ4VA53 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC38.84■■■■□ 3.81
Pds5bQ4VA53 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC38.83■■■■□ 3.81
Pds5bQ4VA53 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC38.83■■■■□ 3.81
Pds5bQ4VA53 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC38.83■■■■□ 3.81
Pds5bQ4VA53 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC38.83■■■■□ 3.81
Pds5bQ4VA53 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC38.83■■■■□ 3.81
Pds5bQ4VA53 Gm10620-201ENSMUST00000098379 1332 ntBASIC38.82■■■■□ 3.81
Pds5bQ4VA53 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC38.81■■■■□ 3.8
Pds5bQ4VA53 Gm43137-201ENSMUST00000198052 594 ntBASIC38.81■■■■□ 3.8
Pds5bQ4VA53 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC38.81■■■■□ 3.8
Pds5bQ4VA53 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC38.8■■■■□ 3.8
Pds5bQ4VA53 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC38.8■■■■□ 3.8
Pds5bQ4VA53 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC38.8■■■■□ 3.8
Pds5bQ4VA53 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC38.79■■■■□ 3.8
Pds5bQ4VA53 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC38.79■■■■□ 3.8
Pds5bQ4VA53 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC38.78■■■■□ 3.8
Pds5bQ4VA53 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC38.77■■■■□ 3.8
Pds5bQ4VA53 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC38.77■■■■□ 3.8
Pds5bQ4VA53 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC38.77■■■■□ 3.8
Pds5bQ4VA53 Mir7075-201ENSMUST00000184187 82 ntBASIC38.77■■■■□ 3.8
Pds5bQ4VA53 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC38.76■■■■□ 3.8
Pds5bQ4VA53 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC38.76■■■■□ 3.8
Pds5bQ4VA53 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC38.76■■■■□ 3.8
Pds5bQ4VA53 AC153524.1-201ENSMUST00000220436 1935 ntBASIC38.76■■■■□ 3.79
Pds5bQ4VA53 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC38.75■■■■□ 3.79
Pds5bQ4VA53 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC38.75■■■■□ 3.79
Pds5bQ4VA53 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC38.75■■■■□ 3.79
Pds5bQ4VA53 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC38.75■■■■□ 3.79
Pds5bQ4VA53 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC38.74■■■■□ 3.79
Pds5bQ4VA53 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC38.74■■■■□ 3.79
Pds5bQ4VA53 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC38.74■■■■□ 3.79
Pds5bQ4VA53 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC38.73■■■■□ 3.79
Pds5bQ4VA53 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC38.73■■■■□ 3.79
Pds5bQ4VA53 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC38.73■■■■□ 3.79
Pds5bQ4VA53 AC153504.1-201ENSMUST00000218379 2290 ntBASIC38.73■■■■□ 3.79
Pds5bQ4VA53 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC38.73■■■■□ 3.79
Pds5bQ4VA53 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC38.72■■■■□ 3.79
Pds5bQ4VA53 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC38.72■■■■□ 3.79
Pds5bQ4VA53 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC38.72■■■■□ 3.79
Pds5bQ4VA53 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC38.72■■■■□ 3.79
Pds5bQ4VA53 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC38.71■■■■□ 3.79
Pds5bQ4VA53 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC38.71■■■■□ 3.79
Pds5bQ4VA53 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
Pds5bQ4VA53 Gm26571-201ENSMUST00000181399 666 ntBASIC38.7■■■■□ 3.79
Pds5bQ4VA53 Gm27405-201ENSMUST00000184201 112 ntBASIC38.7■■■■□ 3.79
Pds5bQ4VA53 AC117245.4-201ENSMUST00000217388 1646 ntBASIC38.7■■■■□ 3.79
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms