Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Spg11Q3UHA3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.52■□□□□ 0.88
Spg11Q3UHA3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Spg11Q3UHA3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Spg11Q3UHA3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Spg11Q3UHA3 Gm43137-201ENSMUST00000198052 594 ntBASIC20.52■□□□□ 0.87
Spg11Q3UHA3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.52■□□□□ 0.87
Spg11Q3UHA3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.52■□□□□ 0.87
Spg11Q3UHA3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Spg11Q3UHA3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Spg11Q3UHA3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Spg11Q3UHA3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Spg11Q3UHA3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Spg11Q3UHA3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Spg11Q3UHA3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Spg11Q3UHA3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Spg11Q3UHA3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Spg11Q3UHA3 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Spg11Q3UHA3 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Spg11Q3UHA3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Spg11Q3UHA3 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Spg11Q3UHA3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Spg11Q3UHA3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Spg11Q3UHA3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Spg11Q3UHA3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Spg11Q3UHA3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Spg11Q3UHA3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.48■□□□□ 0.87
Spg11Q3UHA3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.48■□□□□ 0.87
Spg11Q3UHA3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.48■□□□□ 0.87
Spg11Q3UHA3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Spg11Q3UHA3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Spg11Q3UHA3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Spg11Q3UHA3 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.48■□□□□ 0.87
Spg11Q3UHA3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.48■□□□□ 0.87
Spg11Q3UHA3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Spg11Q3UHA3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.47■□□□□ 0.87
Spg11Q3UHA3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Spg11Q3UHA3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Spg11Q3UHA3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.47■□□□□ 0.87
Spg11Q3UHA3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Spg11Q3UHA3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Spg11Q3UHA3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.46■□□□□ 0.87
Spg11Q3UHA3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.46■□□□□ 0.87
Spg11Q3UHA3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.46■□□□□ 0.87
Spg11Q3UHA3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Spg11Q3UHA3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Spg11Q3UHA3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Spg11Q3UHA3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Spg11Q3UHA3 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Spg11Q3UHA3 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.46■□□□□ 0.87
Spg11Q3UHA3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Spg11Q3UHA3 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.46■□□□□ 0.87
Spg11Q3UHA3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Spg11Q3UHA3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Spg11Q3UHA3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Spg11Q3UHA3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Spg11Q3UHA3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Spg11Q3UHA3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Spg11Q3UHA3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Spg11Q3UHA3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Spg11Q3UHA3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.45■□□□□ 0.86
Spg11Q3UHA3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.44■□□□□ 0.86
Spg11Q3UHA3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Spg11Q3UHA3 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Spg11Q3UHA3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Spg11Q3UHA3 Gm10493-201ENSMUST00000097270 612 ntBASIC20.43■□□□□ 0.86
Spg11Q3UHA3 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Spg11Q3UHA3 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.43■□□□□ 0.86
Spg11Q3UHA3 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Spg11Q3UHA3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Spg11Q3UHA3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Spg11Q3UHA3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.42■□□□□ 0.86
Spg11Q3UHA3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Spg11Q3UHA3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Spg11Q3UHA3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Spg11Q3UHA3 Gm22325-201ENSMUST00000158904 308 ntBASIC20.41■□□□□ 0.86
Spg11Q3UHA3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
Spg11Q3UHA3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Spg11Q3UHA3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Spg11Q3UHA3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Spg11Q3UHA3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Spg11Q3UHA3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Spg11Q3UHA3 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.4■□□□□ 0.86
Spg11Q3UHA3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Spg11Q3UHA3 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Spg11Q3UHA3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Spg11Q3UHA3 Gm43173-201ENSMUST00000202246 593 ntBASIC20.39■□□□□ 0.86
Spg11Q3UHA3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Spg11Q3UHA3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Spg11Q3UHA3 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.38■□□□□ 0.85
Spg11Q3UHA3 Gm8493-201ENSMUST00000196881 489 ntBASIC20.38■□□□□ 0.85
Spg11Q3UHA3 Gm42642-201ENSMUST00000200683 355 ntBASIC20.38■□□□□ 0.85
Spg11Q3UHA3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Spg11Q3UHA3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Spg11Q3UHA3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Spg11Q3UHA3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Spg11Q3UHA3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Spg11Q3UHA3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Spg11Q3UHA3 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.37■□□□□ 0.85
Spg11Q3UHA3 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms