Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cdh6P97326 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cdh6P97326 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.8■■□□□ 1.08
Cdh6P97326 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cdh6P97326 Gm5921-201ENSMUST00000075898 882 ntBASIC21.8■■□□□ 1.08
Cdh6P97326 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cdh6P97326 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdh6P97326 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cdh6P97326 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.79■■□□□ 1.08
Cdh6P97326 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdh6P97326 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdh6P97326 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdh6P97326 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdh6P97326 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.78■■□□□ 1.08
Cdh6P97326 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.78■■□□□ 1.08
Cdh6P97326 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cdh6P97326 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Cdh6P97326 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cdh6P97326 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
Cdh6P97326 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cdh6P97326 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cdh6P97326 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cdh6P97326 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cdh6P97326 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cdh6P97326 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Cdh6P97326 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Cdh6P97326 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.76■■□□□ 1.07
Cdh6P97326 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cdh6P97326 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.76■■□□□ 1.07
Cdh6P97326 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cdh6P97326 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cdh6P97326 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Cdh6P97326 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh6P97326 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Cdh6P97326 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh6P97326 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh6P97326 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh6P97326 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.75■■□□□ 1.07
Cdh6P97326 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Cdh6P97326 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh6P97326 Gm45444-201ENSMUST00000211394 898 ntBASIC21.75■■□□□ 1.07
Cdh6P97326 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Cdh6P97326 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh6P97326 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Cdh6P97326 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.75■■□□□ 1.07
Cdh6P97326 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.74■■□□□ 1.07
Cdh6P97326 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdh6P97326 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdh6P97326 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdh6P97326 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cdh6P97326 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdh6P97326 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdh6P97326 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.73■■□□□ 1.07
Cdh6P97326 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdh6P97326 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdh6P97326 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdh6P97326 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdh6P97326 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh6P97326 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.72■■□□□ 1.07
Cdh6P97326 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.72■■□□□ 1.07
Cdh6P97326 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.72■■□□□ 1.07
Cdh6P97326 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh6P97326 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
Cdh6P97326 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh6P97326 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Cdh6P97326 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.72■■□□□ 1.07
Cdh6P97326 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh6P97326 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh6P97326 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh6P97326 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
Cdh6P97326 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh6P97326 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh6P97326 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh6P97326 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Cdh6P97326 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdh6P97326 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.7■■□□□ 1.06
Cdh6P97326 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdh6P97326 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Cdh6P97326 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdh6P97326 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
Cdh6P97326 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdh6P97326 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.68■■□□□ 1.06
Cdh6P97326 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cdh6P97326 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cdh6P97326 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Cdh6P97326 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdh6P97326 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdh6P97326 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.68■■□□□ 1.06
Cdh6P97326 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdh6P97326 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdh6P97326 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cdh6P97326 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdh6P97326 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Cdh6P97326 Gm43566-201ENSMUST00000196851 808 ntBASIC21.67■■□□□ 1.06
Cdh6P97326 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdh6P97326 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdh6P97326 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdh6P97326 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdh6P97326 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.66■■□□□ 1.06
Cdh6P97326 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms