Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Crnkl1P63154 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Crnkl1P63154 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Crnkl1P63154 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Crnkl1P63154 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Crnkl1P63154 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Crnkl1P63154 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Crnkl1P63154 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Crnkl1P63154 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.05■□□□□ 0.96
Crnkl1P63154 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Crnkl1P63154 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.05■□□□□ 0.96
Crnkl1P63154 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Crnkl1P63154 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Crnkl1P63154 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Crnkl1P63154 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
Crnkl1P63154 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Crnkl1P63154 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Crnkl1P63154 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Crnkl1P63154 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Crnkl1P63154 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Crnkl1P63154 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.03■□□□□ 0.96
Crnkl1P63154 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.03■□□□□ 0.96
Crnkl1P63154 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Crnkl1P63154 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Crnkl1P63154 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Crnkl1P63154 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.03■□□□□ 0.96
Crnkl1P63154 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.03■□□□□ 0.96
Crnkl1P63154 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Crnkl1P63154 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Crnkl1P63154 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Crnkl1P63154 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Crnkl1P63154 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Crnkl1P63154 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Crnkl1P63154 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Crnkl1P63154 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
Crnkl1P63154 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Crnkl1P63154 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Crnkl1P63154 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Crnkl1P63154 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Crnkl1P63154 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Crnkl1P63154 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Crnkl1P63154 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Crnkl1P63154 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21■□□□□ 0.95
Crnkl1P63154 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21■□□□□ 0.95
Crnkl1P63154 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Crnkl1P63154 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.99■□□□□ 0.95
Crnkl1P63154 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Crnkl1P63154 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Crnkl1P63154 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Crnkl1P63154 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Crnkl1P63154 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.99■□□□□ 0.95
Crnkl1P63154 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Crnkl1P63154 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Crnkl1P63154 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Crnkl1P63154 Gm37136-201ENSMUST00000194368 194 ntBASIC20.98■□□□□ 0.95
Crnkl1P63154 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Crnkl1P63154 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Crnkl1P63154 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Crnkl1P63154 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Crnkl1P63154 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Crnkl1P63154 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Crnkl1P63154 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Crnkl1P63154 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Crnkl1P63154 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Crnkl1P63154 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Crnkl1P63154 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.97■□□□□ 0.95
Crnkl1P63154 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Crnkl1P63154 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.97■□□□□ 0.95
Crnkl1P63154 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
Crnkl1P63154 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Crnkl1P63154 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Crnkl1P63154 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Crnkl1P63154 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Crnkl1P63154 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Crnkl1P63154 Iqck-206ENSMUST00000208658 2891 ntBASIC20.96■□□□□ 0.95
Crnkl1P63154 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Crnkl1P63154 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Crnkl1P63154 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Crnkl1P63154 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Crnkl1P63154 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Crnkl1P63154 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Crnkl1P63154 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Crnkl1P63154 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Crnkl1P63154 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Crnkl1P63154 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Crnkl1P63154 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Crnkl1P63154 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Crnkl1P63154 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Crnkl1P63154 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Crnkl1P63154 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.93■□□□□ 0.94
Crnkl1P63154 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Crnkl1P63154 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Crnkl1P63154 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Crnkl1P63154 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Crnkl1P63154 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Crnkl1P63154 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Crnkl1P63154 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Crnkl1P63154 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.92■□□□□ 0.94
Crnkl1P63154 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Crnkl1P63154 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms