Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.91□□□□□ -0.34
Rps28P62858 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rps28P62858 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rps28P62858 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rps28P62858 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rps28P62858 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC12.9□□□□□ -0.34
Rps28P62858 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rps28P62858 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC12.89□□□□□ -0.35
Rps28P62858 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rps28P62858 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC12.89□□□□□ -0.35
Rps28P62858 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rps28P62858 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rps28P62858 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rps28P62858 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rps28P62858 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rps28P62858 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rps28P62858 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rps28P62858 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rps28P62858 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC12.88□□□□□ -0.35
Rps28P62858 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Rps28P62858 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rps28P62858 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rps28P62858 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rps28P62858 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rps28P62858 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rps28P62858 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rps28P62858 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rps28P62858 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rps28P62858 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC12.87□□□□□ -0.35
Rps28P62858 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rps28P62858 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Rps28P62858 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Rps28P62858 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC12.86□□□□□ -0.35
Rps28P62858 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rps28P62858 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rps28P62858 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rps28P62858 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rps28P62858 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rps28P62858 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rps28P62858 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC12.85□□□□□ -0.35
Rps28P62858 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rps28P62858 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rps28P62858 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rps28P62858 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rps28P62858 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rps28P62858 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rps28P62858 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rps28P62858 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC12.84□□□□□ -0.35
Rps28P62858 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rps28P62858 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rps28P62858 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rps28P62858 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rps28P62858 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC12.83□□□□□ -0.35
Rps28P62858 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rps28P62858 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rps28P62858 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Rps28P62858 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rps28P62858 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rps28P62858 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rps28P62858 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rps28P62858 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC12.83□□□□□ -0.36
Rps28P62858 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rps28P62858 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rps28P62858 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Rps28P62858 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rps28P62858 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rps28P62858 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rps28P62858 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rps28P62858 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rps28P62858 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rps28P62858 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rps28P62858 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC12.82□□□□□ -0.36
Rps28P62858 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rps28P62858 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rps28P62858 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rps28P62858 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rps28P62858 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rps28P62858 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rps28P62858 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rps28P62858 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rps28P62858 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rps28P62858 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rps28P62858 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rps28P62858 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rps28P62858 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rps28P62858 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rps28P62858 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rps28P62858 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC12.81□□□□□ -0.36
Rps28P62858 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rps28P62858 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rps28P62858 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC12.8□□□□□ -0.36
Rps28P62858 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rps28P62858 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rps28P62858 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rps28P62858 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rps28P62858 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Rps28P62858 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rps28P62858 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rps28P62858 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rps28P62858 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms