Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vbp1P61759 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vbp1P61759 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vbp1P61759 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.44■□□□□ 0.7
Vbp1P61759 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vbp1P61759 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vbp1P61759 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Vbp1P61759 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vbp1P61759 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vbp1P61759 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vbp1P61759 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vbp1P61759 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vbp1P61759 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vbp1P61759 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vbp1P61759 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vbp1P61759 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vbp1P61759 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vbp1P61759 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vbp1P61759 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vbp1P61759 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Vbp1P61759 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vbp1P61759 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vbp1P61759 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vbp1P61759 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vbp1P61759 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vbp1P61759 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vbp1P61759 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vbp1P61759 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.41■□□□□ 0.7
Vbp1P61759 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vbp1P61759 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vbp1P61759 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vbp1P61759 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vbp1P61759 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Vbp1P61759 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vbp1P61759 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.41■□□□□ 0.7
Vbp1P61759 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.41■□□□□ 0.7
Vbp1P61759 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vbp1P61759 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vbp1P61759 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vbp1P61759 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vbp1P61759 Gm22567-201ENSMUST00000175542 342 ntBASIC19.4■□□□□ 0.7
Vbp1P61759 Gm24970-201ENSMUST00000175582 82 ntBASIC19.4■□□□□ 0.7
Vbp1P61759 Gm37136-201ENSMUST00000194368 194 ntBASIC19.4■□□□□ 0.7
Vbp1P61759 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vbp1P61759 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.4■□□□□ 0.7
Vbp1P61759 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.39■□□□□ 0.7
Vbp1P61759 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Vbp1P61759 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vbp1P61759 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vbp1P61759 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Vbp1P61759 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vbp1P61759 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Vbp1P61759 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.38■□□□□ 0.69
Vbp1P61759 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vbp1P61759 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vbp1P61759 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vbp1P61759 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Vbp1P61759 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Vbp1P61759 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
Vbp1P61759 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vbp1P61759 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Vbp1P61759 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Vbp1P61759 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Vbp1P61759 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vbp1P61759 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vbp1P61759 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vbp1P61759 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vbp1P61759 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vbp1P61759 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.36■□□□□ 0.69
Vbp1P61759 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vbp1P61759 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vbp1P61759 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vbp1P61759 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vbp1P61759 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vbp1P61759 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vbp1P61759 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.34■□□□□ 0.69
Vbp1P61759 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vbp1P61759 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Vbp1P61759 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vbp1P61759 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Vbp1P61759 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vbp1P61759 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vbp1P61759 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.33■□□□□ 0.68
Vbp1P61759 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Vbp1P61759 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.33■□□□□ 0.68
Vbp1P61759 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vbp1P61759 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vbp1P61759 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vbp1P61759 Zfp131-205ENSMUST00000223812 663 ntBASIC19.32■□□□□ 0.68
Vbp1P61759 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vbp1P61759 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vbp1P61759 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vbp1P61759 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vbp1P61759 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vbp1P61759 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vbp1P61759 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vbp1P61759 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vbp1P61759 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vbp1P61759 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Vbp1P61759 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms