Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cks2P56390 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.89■□□□□ 0.45
Cks2P56390 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Cks2P56390 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cks2P56390 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cks2P56390 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cks2P56390 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cks2P56390 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Cks2P56390 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cks2P56390 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Cks2P56390 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Cks2P56390 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cks2P56390 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.87■□□□□ 0.45
Cks2P56390 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.87■□□□□ 0.45
Cks2P56390 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.87■□□□□ 0.45
Cks2P56390 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cks2P56390 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cks2P56390 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Cks2P56390 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cks2P56390 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cks2P56390 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cks2P56390 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.86■□□□□ 0.45
Cks2P56390 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Cks2P56390 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cks2P56390 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cks2P56390 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cks2P56390 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.86■□□□□ 0.45
Cks2P56390 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cks2P56390 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cks2P56390 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Cks2P56390 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cks2P56390 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.85■□□□□ 0.45
Cks2P56390 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.85■□□□□ 0.45
Cks2P56390 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cks2P56390 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cks2P56390 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cks2P56390 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Cks2P56390 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cks2P56390 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.84■□□□□ 0.45
Cks2P56390 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.84■□□□□ 0.45
Cks2P56390 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.84■□□□□ 0.45
Cks2P56390 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Cks2P56390 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cks2P56390 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Cks2P56390 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cks2P56390 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Cks2P56390 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cks2P56390 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cks2P56390 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cks2P56390 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cks2P56390 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cks2P56390 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cks2P56390 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cks2P56390 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cks2P56390 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cks2P56390 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cks2P56390 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cks2P56390 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.81■□□□□ 0.44
Cks2P56390 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cks2P56390 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cks2P56390 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cks2P56390 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cks2P56390 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cks2P56390 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cks2P56390 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.8■□□□□ 0.44
Cks2P56390 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cks2P56390 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cks2P56390 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Cks2P56390 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.79■□□□□ 0.44
Cks2P56390 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cks2P56390 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cks2P56390 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cks2P56390 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cks2P56390 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cks2P56390 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cks2P56390 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cks2P56390 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cks2P56390 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cks2P56390 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cks2P56390 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cks2P56390 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.78■□□□□ 0.44
Cks2P56390 Gm44428-201ENSMUST00000204474 874 ntBASIC17.78■□□□□ 0.44
Cks2P56390 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cks2P56390 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Cks2P56390 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cks2P56390 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cks2P56390 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cks2P56390 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cks2P56390 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cks2P56390 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cks2P56390 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cks2P56390 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.76■□□□□ 0.43
Cks2P56390 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cks2P56390 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cks2P56390 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cks2P56390 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cks2P56390 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cks2P56390 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cks2P56390 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cks2P56390 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms