Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Hmgcs2P54869 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Hmgcs2P54869 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.23■■□□□ 1.47
Hmgcs2P54869 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Hmgcs2P54869 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC24.23■■□□□ 1.47
Hmgcs2P54869 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC24.23■■□□□ 1.47
Hmgcs2P54869 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC24.23■■□□□ 1.47
Hmgcs2P54869 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Hmgcs2P54869 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Hmgcs2P54869 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC24.22■■□□□ 1.47
Hmgcs2P54869 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Hmgcs2P54869 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Hmgcs2P54869 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Hmgcs2P54869 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Hmgcs2P54869 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Hmgcs2P54869 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC24.21■■□□□ 1.47
Hmgcs2P54869 Gm12922-201ENSMUST00000120626 809 ntBASIC24.21■■□□□ 1.47
Hmgcs2P54869 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Hmgcs2P54869 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC24.21■■□□□ 1.47
Hmgcs2P54869 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC24.2■■□□□ 1.46
Hmgcs2P54869 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC24.2■■□□□ 1.46
Hmgcs2P54869 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Hmgcs2P54869 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
Hmgcs2P54869 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Hmgcs2P54869 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Hmgcs2P54869 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Hmgcs2P54869 Gm6934-201ENSMUST00000194780 1905 ntBASIC24.19■■□□□ 1.46
Hmgcs2P54869 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
Hmgcs2P54869 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Hmgcs2P54869 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Hmgcs2P54869 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC24.18■■□□□ 1.46
Hmgcs2P54869 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Hmgcs2P54869 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Hmgcs2P54869 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Hmgcs2P54869 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC24.17■■□□□ 1.46
Hmgcs2P54869 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC24.17■■□□□ 1.46
Hmgcs2P54869 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Hmgcs2P54869 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
Hmgcs2P54869 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Hmgcs2P54869 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC24.16■■□□□ 1.46
Hmgcs2P54869 AC140930.3-201ENSMUST00000222935 274 ntBASIC24.16■■□□□ 1.46
Hmgcs2P54869 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Hmgcs2P54869 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Hmgcs2P54869 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.15■■□□□ 1.46
Hmgcs2P54869 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Hmgcs2P54869 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
Hmgcs2P54869 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Hmgcs2P54869 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Hmgcs2P54869 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Hmgcs2P54869 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Hmgcs2P54869 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Hmgcs2P54869 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC24.14■■□□□ 1.45
Hmgcs2P54869 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
Hmgcs2P54869 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Hmgcs2P54869 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Hmgcs2P54869 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC24.13■■□□□ 1.45
Hmgcs2P54869 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
Hmgcs2P54869 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Hmgcs2P54869 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC24.12■■□□□ 1.45
Hmgcs2P54869 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Hmgcs2P54869 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Hmgcs2P54869 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Hmgcs2P54869 Gm10620-201ENSMUST00000098379 1332 ntBASIC24.11■■□□□ 1.45
Hmgcs2P54869 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC24.11■■□□□ 1.45
Hmgcs2P54869 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Hmgcs2P54869 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Hmgcs2P54869 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Hmgcs2P54869 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC24.1■■□□□ 1.45
Hmgcs2P54869 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC24.1■■□□□ 1.45
Hmgcs2P54869 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Hmgcs2P54869 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC24.1■■□□□ 1.45
Hmgcs2P54869 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Hmgcs2P54869 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Hmgcs2P54869 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Hmgcs2P54869 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Hmgcs2P54869 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC24.09■■□□□ 1.45
Hmgcs2P54869 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Hmgcs2P54869 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Hmgcs2P54869 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC24.09■■□□□ 1.45
Hmgcs2P54869 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Hmgcs2P54869 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Hmgcs2P54869 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Hmgcs2P54869 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Hmgcs2P54869 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC24.08■■□□□ 1.45
Hmgcs2P54869 Appbp2os-202ENSMUST00000206972 447 ntBASIC24.08■■□□□ 1.45
Hmgcs2P54869 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Hmgcs2P54869 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Hmgcs2P54869 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Hmgcs2P54869 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Hmgcs2P54869 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Hmgcs2P54869 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Hmgcs2P54869 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC24.07■■□□□ 1.44
Hmgcs2P54869 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Hmgcs2P54869 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Hmgcs2P54869 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Hmgcs2P54869 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Hmgcs2P54869 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Hmgcs2P54869 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC24.05■■□□□ 1.44
Hmgcs2P54869 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Hmgcs2P54869 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC24.05■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms