Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
Sox1P53783 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sox1P53783 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Sox1P53783 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sox1P53783 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sox1P53783 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sox1P53783 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sox1P53783 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Sox1P53783 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sox1P53783 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.38■■□□□ 1.17
Sox1P53783 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Sox1P53783 Gm42569-201ENSMUST00000200539 472 ntBASIC22.38■■□□□ 1.17
Sox1P53783 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.38■■□□□ 1.17
Sox1P53783 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sox1P53783 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sox1P53783 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sox1P53783 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sox1P53783 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sox1P53783 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC22.36■■□□□ 1.17
Sox1P53783 Mir7075-201ENSMUST00000184187 82 ntBASIC22.36■■□□□ 1.17
Sox1P53783 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Sox1P53783 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sox1P53783 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Sox1P53783 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.35■■□□□ 1.17
Sox1P53783 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sox1P53783 Gm37179-201ENSMUST00000194862 823 ntBASIC22.35■■□□□ 1.17
Sox1P53783 Gm43137-201ENSMUST00000198052 594 ntBASIC22.35■■□□□ 1.17
Sox1P53783 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC22.35■■□□□ 1.17
Sox1P53783 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.35■■□□□ 1.17
Sox1P53783 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Sox1P53783 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sox1P53783 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
Sox1P53783 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Sox1P53783 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sox1P53783 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sox1P53783 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sox1P53783 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sox1P53783 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sox1P53783 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Sox1P53783 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Sox1P53783 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sox1P53783 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sox1P53783 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sox1P53783 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sox1P53783 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sox1P53783 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sox1P53783 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Sox1P53783 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sox1P53783 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
Sox1P53783 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Sox1P53783 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sox1P53783 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sox1P53783 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Sox1P53783 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.31■■□□□ 1.16
Sox1P53783 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sox1P53783 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC22.31■■□□□ 1.16
Sox1P53783 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sox1P53783 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sox1P53783 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sox1P53783 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.3■■□□□ 1.16
Sox1P53783 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Sox1P53783 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sox1P53783 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Sox1P53783 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Sox1P53783 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Sox1P53783 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Sox1P53783 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sox1P53783 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.29■■□□□ 1.16
Sox1P53783 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC22.29■■□□□ 1.16
Sox1P53783 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Sox1P53783 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.29■■□□□ 1.16
Sox1P53783 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sox1P53783 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Sox1P53783 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC22.28■■□□□ 1.16
Sox1P53783 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sox1P53783 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sox1P53783 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sox1P53783 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Sox1P53783 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Sox1P53783 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Sox1P53783 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sox1P53783 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC22.25■■□□□ 1.15
Sox1P53783 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC22.25■■□□□ 1.15
Sox1P53783 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Sox1P53783 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sox1P53783 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.24■■□□□ 1.15
Sox1P53783 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Sox1P53783 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Sox1P53783 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC22.24■■□□□ 1.15
Sox1P53783 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC22.24■■□□□ 1.15
Sox1P53783 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Sox1P53783 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Sox1P53783 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC22.24■■□□□ 1.15
Sox1P53783 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC22.24■■□□□ 1.15
Sox1P53783 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.24■■□□□ 1.15
Sox1P53783 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
Sox1P53783 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Sox1P53783 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sox1P53783 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sox1P53783 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 178 ms