Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Nek1P51954 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.89■■□□□ 1.41
Nek1P51954 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Nek1P51954 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
Nek1P51954 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Nek1P51954 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
Nek1P51954 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Nek1P51954 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Nek1P51954 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.88■■□□□ 1.41
Nek1P51954 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC23.88■■□□□ 1.41
Nek1P51954 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Nek1P51954 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Nek1P51954 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC23.87■■□□□ 1.41
Nek1P51954 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC23.87■■□□□ 1.41
Nek1P51954 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Nek1P51954 Gm38160-201ENSMUST00000193090 2499 ntBASIC23.87■■□□□ 1.41
Nek1P51954 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Nek1P51954 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.87■■□□□ 1.41
Nek1P51954 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Nek1P51954 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC23.86■■□□□ 1.41
Nek1P51954 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Nek1P51954 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Nek1P51954 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC23.86■■□□□ 1.41
Nek1P51954 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC23.86■■□□□ 1.41
Nek1P51954 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Nek1P51954 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Nek1P51954 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
Nek1P51954 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Nek1P51954 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Nek1P51954 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
Nek1P51954 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Nek1P51954 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Nek1P51954 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.85■■□□□ 1.41
Nek1P51954 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Nek1P51954 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.85■■□□□ 1.41
Nek1P51954 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Nek1P51954 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Nek1P51954 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Nek1P51954 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.84■■□□□ 1.41
Nek1P51954 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Nek1P51954 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Nek1P51954 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Nek1P51954 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Nek1P51954 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Nek1P51954 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Nek1P51954 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Nek1P51954 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC23.83■■□□□ 1.4
Nek1P51954 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC23.82■■□□□ 1.4
Nek1P51954 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC23.82■■□□□ 1.4
Nek1P51954 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.82■■□□□ 1.4
Nek1P51954 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Nek1P51954 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Nek1P51954 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Nek1P51954 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Nek1P51954 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Nek1P51954 Gm10420-201ENSMUST00000121713 882 ntBASIC23.81■■□□□ 1.4
Nek1P51954 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Nek1P51954 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.81■■□□□ 1.4
Nek1P51954 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Nek1P51954 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Nek1P51954 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Nek1P51954 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Nek1P51954 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Nek1P51954 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.8■■□□□ 1.4
Nek1P51954 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Nek1P51954 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Nek1P51954 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Nek1P51954 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nek1P51954 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nek1P51954 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nek1P51954 Gm42418-201ENSMUST00000182010 1831 ntBASIC23.79■■□□□ 1.4
Nek1P51954 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC23.78■■□□□ 1.4
Nek1P51954 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC23.78■■□□□ 1.4
Nek1P51954 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nek1P51954 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nek1P51954 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC23.78■■□□□ 1.4
Nek1P51954 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nek1P51954 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Nek1P51954 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Nek1P51954 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nek1P51954 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Nek1P51954 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nek1P51954 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nek1P51954 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Nek1P51954 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC23.76■■□□□ 1.39
Nek1P51954 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Nek1P51954 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Nek1P51954 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Nek1P51954 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Nek1P51954 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nek1P51954 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nek1P51954 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nek1P51954 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nek1P51954 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Nek1P51954 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Nek1P51954 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Nek1P51954 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nek1P51954 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Nek1P51954 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nek1P51954 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms