Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Rfx3P48381 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx3P48381 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx3P48381 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.28■□□□□ 0.68
Rfx3P48381 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx3P48381 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rfx3P48381 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx3P48381 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx3P48381 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfx3P48381 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfx3P48381 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfx3P48381 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfx3P48381 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Rfx3P48381 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rfx3P48381 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Rfx3P48381 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx3P48381 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.26■□□□□ 0.67
Rfx3P48381 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.26■□□□□ 0.67
Rfx3P48381 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx3P48381 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rfx3P48381 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx3P48381 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx3P48381 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
Rfx3P48381 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx3P48381 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx3P48381 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rfx3P48381 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx3P48381 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx3P48381 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx3P48381 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx3P48381 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx3P48381 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx3P48381 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.23■□□□□ 0.67
Rfx3P48381 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx3P48381 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx3P48381 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.23■□□□□ 0.67
Rfx3P48381 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx3P48381 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx3P48381 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rfx3P48381 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx3P48381 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.22■□□□□ 0.67
Rfx3P48381 Gm22567-201ENSMUST00000175542 342 ntBASIC19.22■□□□□ 0.67
Rfx3P48381 Mir6538-201ENSMUST00000183713 110 ntBASIC19.22■□□□□ 0.67
Rfx3P48381 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rfx3P48381 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx3P48381 Notumos-201ENSMUST00000151998 2659 ntBASIC19.22■□□□□ 0.67
Rfx3P48381 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Rfx3P48381 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx3P48381 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx3P48381 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx3P48381 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx3P48381 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.21■□□□□ 0.67
Rfx3P48381 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rfx3P48381 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx3P48381 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx3P48381 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx3P48381 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Rfx3P48381 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx3P48381 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx3P48381 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rfx3P48381 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx3P48381 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx3P48381 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx3P48381 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx3P48381 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx3P48381 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx3P48381 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx3P48381 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rfx3P48381 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx3P48381 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx3P48381 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx3P48381 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx3P48381 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx3P48381 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rfx3P48381 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx3P48381 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx3P48381 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx3P48381 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.18■□□□□ 0.66
Rfx3P48381 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx3P48381 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx3P48381 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx3P48381 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx3P48381 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx3P48381 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx3P48381 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx3P48381 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
Rfx3P48381 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx3P48381 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.17■□□□□ 0.66
Rfx3P48381 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx3P48381 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.17■□□□□ 0.66
Rfx3P48381 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfx3P48381 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rfx3P48381 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfx3P48381 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Rfx3P48381 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx3P48381 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Rfx3P48381 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx3P48381 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.15■□□□□ 0.66
Rfx3P48381 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx3P48381 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms